Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_E14
         (340 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    26   1.8  
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo...    25   2.4  
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo...    25   2.4  
SPAC1565.07c |||TATA binding protein interacting protein |Schizo...    25   3.2  
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch...    25   4.2  
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa...    24   7.3  
SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa...    24   7.3  
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc...    23   9.6  

>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 3655

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 212  LFPKHFSLLYNYTSLVELEFYFEIY 286
            ++  H SLL+++  +VEL+  F IY
Sbjct: 2701 VYQSHVSLLHHFQEIVELQEAFGIY 2725


>SPCC126.09 |||vacuolar membrane zinc transporter
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 418

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 275 NKILALLTMYSCIIS*SAWGIVFGNSFY*LLNIYKFYTFVXRE-NICTF 132
           N ++  L   S I+  S+W  V   SF+ L  I  F TF+ R    C F
Sbjct: 75  NALVTGLATSSGILLYSSWASVMQESFHFLEKISMFDTFLVRVFQFCAF 123


>SPBC13A2.03 |||phosphatidate
           cytidylyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 439

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 25  IYLHHQLLSFRLFTXNLSLSXPSAVXSNYYF 117
           + LHH+ +SF L+     L   S    NY F
Sbjct: 145 LVLHHRFISFMLYIIGFVLFVASLKKGNYKF 175


>SPAC1565.07c |||TATA binding protein interacting protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1220

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 188 INKNYSQTLFPKHFSLLYNYTSLVELEFY 274
           +NK Y+ T+FP    +L  Y ++ + EF+
Sbjct: 118 VNKFYTSTVFPSFLQILKQY-NVAQEEFF 145


>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1031

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 18  LIHLPAPPTFVISAFHXKSVFVXSI 92
           L+HLPAP  F +  F  K+  + +I
Sbjct: 713 LMHLPAPQAFALLVFLFKNYHLQNI 737


>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 422

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 44  FCHFGFSLXICLCLXHL 94
           FC +G+ L +C C  +L
Sbjct: 275 FCFYGYVLWLCWCTMYL 291


>SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog
           1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 941

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 164 YKIYKYLTINKNYSQTLFPKHFSLLYNYT-SLVELEFY 274
           Y   KYL+   N+S+TLF  H   L N T S   +E Y
Sbjct: 842 YGCLKYLS-TINHSRTLFATHAHQLTNLTKSFKNVECY 878


>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 611

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 197 NYSQTLFPKHFSLLYN 244
           +YS+T+F KHF  L N
Sbjct: 284 DYSETVFGKHFQELAN 299


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,143,415
Number of Sequences: 5004
Number of extensions: 17924
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)