Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_E12
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 398 e-111
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 352 2e-97
Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical pr... 32 0.50
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 32 0.66
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF067942-1|AAG45570.1| 488|Caenorhabditis elegans Hypothetical ... 30 2.7
AL032620-1|CAA21487.1| 354|Caenorhabditis elegans Hypothetical ... 28 8.1
AF025469-2|AAG00033.2| 470|Caenorhabditis elegans Taf (tbp-asso... 28 8.1
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 398 bits (981), Expect = e-111
Identities = 185/244 (75%), Positives = 213/244 (87%), Gaps = 2/244 (0%)
Frame = -1
Query: 896 EAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYDGRF 717
+ I+ V ++KG GV+L+M+NTD SI DFAH+SFK+AL RK+PLYLSTKNTILKKYDGRF
Sbjct: 164 QTIQETVFDFKGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPLYLSTKNTILKKYDGRF 223
Query: 716 KDIFQDIYDREYKKQFEDAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSVAQ 537
KDIF +IY EY+ +F+ AGIWYEHRLIDDMVA AMKS+GGFVWACKNYDGDVQSDSVAQ
Sbjct: 224 KDIFAEIYP-EYEAEFKAAGIWYEHRLIDDMVAQAMKSDGGFVWACKNYDGDVQSDSVAQ 282
Query: 536 GYGSLGLMTSVLICPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHR 357
GYGSLGLMTSVL+CPDGKTVEAEAAHGTVTRH+R +Q+G+ETSTNPIASIFAW+RGL HR
Sbjct: 283 GYGSLGLMTSVLVCPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHR 342
Query: 356 AKLDNNDALKNFAETLEKVCIETIESGIMTKDLAICIKGMN--NVKRSDYYETFEFMDKL 183
A LD N AL+ FA LE VCIET+E+G +TKDLAIC+KG N V R+DY TFEF+DKL
Sbjct: 343 ATLDKNSALETFANNLEAVCIETMEAGFLTKDLAICVKGGNASAVTRTDYLNTFEFLDKL 402
Query: 182 AENL 171
AENL
Sbjct: 403 AENL 406
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 352 bits (865), Expect = 2e-97
Identities = 163/244 (66%), Positives = 195/244 (79%), Gaps = 1/244 (0%)
Frame = -1
Query: 911 KPXSGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKK 732
KP + + +V K GV LAM+NTD SI FAHS F++AL +++PLYLSTKNTILKK
Sbjct: 181 KPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNTILKK 240
Query: 731 YDGRFKDIFQDIYDREYKKQFEDAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQS 552
YDGRFKDIFQDIY+++Y+ F++ IWYEHRLIDD VA A+KS GGFVWACKNYDGDVQS
Sbjct: 241 YDGRFKDIFQDIYEKKYEADFKNNKIWYEHRLIDDQVAQALKSSGGFVWACKNYDGDVQS 300
Query: 551 DSVAQGYGSLGLMTSVLICPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTR 372
D VAQGYGSLGLM+SVL+CPDGKT+EAEAAHGTVTRH+R +Q+G TSTNPIASIFAWTR
Sbjct: 301 DIVAQGYGSLGLMSSVLMCPDGKTIEAEAAHGTVTRHYREHQKGNSTSTNPIASIFAWTR 360
Query: 371 GLLHRAKLDNNDALKNFAETLEKVCIETIESGIMTKDLAICIKG-MNNVKRSDYYETFEF 195
GL HR LDNN+ALK F+ TLEK CI+T+E G MTKDL+ICI G ++ Y T +F
Sbjct: 361 GLHHRGVLDNNEALKTFSLTLEKACIDTVEEGKMTKDLSICIHGTKKGTEKGAYLITEDF 420
Query: 194 MDKL 183
+ +
Sbjct: 421 LSAI 424
>Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical
protein C39E9.8b protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = -1
Query: 413 TSTNPIASIFAWTRGLLHRAKLDNNDALKNFAETLEKVCIETIESGIMTKDLAI-CIKGM 237
T+T+PI SI +L+RAKL ++ + + ++VC+E E + KD + C +
Sbjct: 21 TATDPIDSISTQGADILNRAKL-TGQTVRQCSCSEQRVCVE--EMKLQAKDCTVPCFQKF 77
Query: 236 NNV--KRSDYYETFEFMDKLAEN 174
+++ + +D + F+ D + E+
Sbjct: 78 SSITSRPNDLKKCFDEKDNILED 100
>Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical
protein C39E9.8a protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = -1
Query: 413 TSTNPIASIFAWTRGLLHRAKLDNNDALKNFAETLEKVCIETIESGIMTKDLAI-CIKGM 237
T+T+PI SI +L+RAKL ++ + + ++VC+E E + KD + C +
Sbjct: 21 TATDPIDSISTQGADILNRAKL-TGQTVRQCSCSEQRVCVE--EMKLQAKDCTVPCFQKF 77
Query: 236 NNV--KRSDYYETFEFMDKLAEN 174
+++ + +D + F+ D + E+
Sbjct: 78 SSITSRPNDLKKCFDEKDNILED 100
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 521 PVTHSPEQHYQIVRLHHNFCRPRQIHPLIS 610
PVT +PE+H + V+L HN P + PL++
Sbjct: 1208 PVTVTPEEHAEQVQLLHNLQNPSILRPLLN 1237
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 833 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 675
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 266 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 320
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 833 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 675
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 625 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 679
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 833 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 675
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 629 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 683
>AF067942-1|AAG45570.1| 488|Caenorhabditis elegans Hypothetical
protein ZK6.8 protein.
Length = 488
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = -1
Query: 560 VQSDSVAQGYGSLGLMTSVLICPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFA 381
+ S + G G + L+T L G V + A+ TVT+HF ++ +T + S+FA
Sbjct: 159 IGSSCMIVGAGIIALIT-FLTAGQGSEVAMDLANATVTQHFE--RRFSDTEIYLLFSVFA 215
Query: 380 WTR--GLLHRAKLDNNDALKNFAETLEKV 300
G + A L +ND + N E+ +K+
Sbjct: 216 AISFVGCITFALLPSND-IGNCIESSKKI 243
>AL032620-1|CAA21487.1| 354|Caenorhabditis elegans Hypothetical
protein Y36E3A.1 protein.
Length = 354
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = -1
Query: 422 GKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAETLEKVCIETIESGIMTKDLAICIK 243
G S PI S+F + + L+H+ ++ +DA+K E L+K ++ G ++A I+
Sbjct: 255 GIGNSILPIQSLFHFEKFLIHKLRITVDDAIK-IKEMLDKP--NNLKDGYFRVEIANKIE 311
Query: 242 -----GMNNVKRSD----YYETFEFMDKLAENLKVAL 159
G + + R+ YY+T E + L + + +AL
Sbjct: 312 LARVFGTDYIDRNGEITMYYQTEERLKYLIKFIPIAL 348
>AF025469-2|AAG00033.2| 470|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 6.1
protein.
Length = 470
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -1
Query: 419 KETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAETLEKVCIETIESGIMTKDLAICIKG 240
K T ++ S R + AK+D LK T+E I T+E I KD+ G
Sbjct: 189 KNTPSSSTTSSLQMFRDAVKTAKIDQKVGLK--PSTIE---ILTVEQQIFMKDIITVCMG 243
Query: 239 MNNVKRSDYYETFE 198
++ KR + T E
Sbjct: 244 QDDKKRHEALYTLE 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,649,710
Number of Sequences: 27780
Number of extensions: 410224
Number of successful extensions: 946
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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