Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_E06
         (355 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535...    27   5.6  
06_03_0266 + 18933638-18933961,18934179-18934541                       26   9.8  

>01_06_0994 +
           33653055-33653144,33653219-33653310,33653483-33653580,
           33653758-33653913,33654009-33654628,33654721-33654794,
           33654905-33655156,33655250-33655367,33655468-33655639,
           33655729-33656270
          Length = 737

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 194 NNKSGIALEAIDWSGICTSLDLN 126
           NN SG +   + + G+CT  DLN
Sbjct: 362 NNSSGSSFRLLAYGGLCTKDDLN 384


>06_03_0266 + 18933638-18933961,18934179-18934541
          Length = 228

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 AKYLNLNWYKCQTNQWLLKQFHFC 190
           A+++  NW K  TNQ L K+F  C
Sbjct: 127 ARHIYANWRKRYTNQKLQKKFWNC 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,988,716
Number of Sequences: 37544
Number of extensions: 132916
Number of successful extensions: 176
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)