Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_E06
(355 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein. 33 0.33
AK128516-1|BAC87475.1| 788|Homo sapiens protein ( Homo sapiens ... 33 0.33
AK091270-1|BAC03623.1| 293|Homo sapiens protein ( Homo sapiens ... 33 0.33
AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette tr... 33 0.33
Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein. 32 0.44
U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette tran... 32 0.44
AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter pro... 32 0.44
AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette tr... 32 0.44
AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein p... 32 0.44
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 32 0.58
AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9... 32 0.58
AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5... 32 0.58
AK058170-1|BAB71700.1| 364|Homo sapiens protein ( Homo sapiens ... 32 0.58
AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens ... 32 0.58
AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette pr... 32 0.58
AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette su... 32 0.58
AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette su... 32 0.58
AB067475-1|BAB67781.1| 737|Homo sapiens KIAA1888 protein protein. 32 0.58
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 32 0.58
AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette, s... 31 0.77
AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette, s... 31 0.77
AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette tr... 31 0.77
AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1 ... 31 0.77
AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette tr... 31 0.77
AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein. 31 0.77
AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding tr... 31 0.77
AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein. 31 0.77
BC051320-1|AAH51320.1| 419|Homo sapiens ABCA10 protein protein. 31 1.3
BC031026-1|AAH31026.1| 111|Homo sapiens ABCA10 protein protein. 31 1.3
AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette su... 31 1.3
AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette su... 31 1.3
AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A1... 31 1.3
BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein. 30 2.4
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 30 2.4
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 30 2.4
AL162060-1|CAB82398.1| 373|Homo sapiens hypothetical protein pr... 30 2.4
AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens ... 30 2.4
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 30 2.4
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 30 2.4
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 2.4
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 2.4
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 30 2.4
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 30 2.4
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 28 7.2
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 28 7.2
AL080207-1|CAB45776.1| 196|Homo sapiens hypothetical protein pr... 28 7.2
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 28 7.2
AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member ... 28 7.2
AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7 p... 28 7.2
AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transpor... 28 7.2
AC114780-1|AAY24230.1| 182|Homo sapiens unknown protein. 28 7.2
AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein. 28 7.2
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein. 28 9.5
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein. 28 9.5
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s... 28 9.5
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p... 28 9.5
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ... 28 9.5
>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
Length = 5058
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 331 NERTIPRR*RYSISQTTLEQIFLQFTKYQRE 239
N +T YSI+QTTLEQ+F+ F Q++
Sbjct: 5008 NNKTFLNIKHYSINQTTLEQVFINFASEQQQ 5038
>AK128516-1|BAC87475.1| 788|Homo sapiens protein ( Homo sapiens
cDNA FLJ46673 fis, clone TRACH3009061, weakly similar
to ATP-binding cassette, sub-family A, member 1. ).
Length = 788
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 331 NERTIPRR*RYSISQTTLEQIFLQFTKYQRE 239
N +T YSI+QTTLEQ+F+ F Q++
Sbjct: 738 NNKTFLNIKHYSINQTTLEQVFINFASEQQQ 768
>AK091270-1|BAC03623.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ33951 fis, clone CTONG2018483, weakly similar to
ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 1. ).
Length = 293
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 331 NERTIPRR*RYSISQTTLEQIFLQFTKYQRE 239
N +T YSI+QTTLEQ+F+ F Q++
Sbjct: 243 NNKTFLNIKHYSINQTTLEQVFINFASEQQQ 273
>AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette
transporter A13 protein.
Length = 2127
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 331 NERTIPRR*RYSISQTTLEQIFLQFTKYQRE 239
N +T YSI+QTTLEQ+F+ F Q++
Sbjct: 2077 NNKTFLNIKHYSINQTTLEQVFINFASEQQQ 2107
>Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein.
Length = 2273
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS++QTTL+Q+F+ F K Q E
Sbjct: 2234 YSVTQTTLDQVFVNFAKQQTE 2254
>U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS++QTTL+Q+F+ F K Q E
Sbjct: 2234 YSVTQTTLDQVFVNFAKQQTE 2254
>AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter protein.
Length = 2273
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS++QTTL+Q+F+ F K Q E
Sbjct: 2234 YSVTQTTLDQVFVNFAKQQTE 2254
>AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS++QTTL+Q+F+ F K Q E
Sbjct: 2234 YSVTQTTLDQVFVNFAKQQTE 2254
>AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein
protein.
Length = 2303
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS++QTTL+Q+F+ F K Q E
Sbjct: 2264 YSVTQTTLDQVFVNFAKQQTE 2284
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ+TLEQ+FL+ +K Q G
Sbjct: 1580 YSLSQSTLEQVFLELSKEQELG 1601
>AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9
protein.
Length = 1624
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ+TLEQ+FL+ +K Q G
Sbjct: 1583 YSLSQSTLEQVFLELSKEQELG 1604
>AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5
protein.
Length = 1642
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS SQ TLEQ+F++ TK Q E
Sbjct: 1598 YSFSQATLEQVFVELTKEQEE 1618
>AK058170-1|BAB71700.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25441 fis, clone TST08455. ).
Length = 364
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS SQ TLEQ+F++ TK Q E
Sbjct: 320 YSFSQATLEQVFVELTKEQEE 340
>AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ31971 fis, clone NT2RP7008137, weakly similar to
ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 1. ).
Length = 865
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS SQ TLEQ+F++ TK Q E
Sbjct: 821 YSFSQATLEQVFVELTKEQEE 841
>AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette protein
protein.
Length = 1642
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS SQ TLEQ+F++ TK Q E
Sbjct: 1598 YSFSQATLEQVFVELTKEQEE 1618
>AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ+TLEQ+FL+ +K Q G
Sbjct: 1583 YSLSQSTLEQVFLELSKEQELG 1604
>AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ+TLEQ+FL+ +K Q G
Sbjct: 1583 YSLSQSTLEQVFLELSKEQELG 1604
>AB067475-1|BAB67781.1| 737|Homo sapiens KIAA1888 protein protein.
Length = 737
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS SQ TLEQ+F++ TK Q E
Sbjct: 693 YSFSQATLEQVFVELTKEQEE 713
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ+TLEQ+FL+ +K Q G
Sbjct: 1550 YSLSQSTLEQVFLELSKEQELG 1571
>AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberisiae) protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette
transporter-1 (ABC-1) protein.
Length = 2201
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2146 YSVSQTTLDQVFVNFAKDQSD 2166
>AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1
sub-family A member 1 protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette
transporter 1 protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding
transporter 1 protein.
Length = 2201
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2146 YSVSQTTLDQVFVNFAKDQSD 2166
>AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+Q+F+ F K Q +
Sbjct: 2206 YSVSQTTLDQVFVNFAKDQSD 2226
>BC051320-1|AAH51320.1| 419|Homo sapiens ABCA10 protein protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLEQ+FL+ K Q G
Sbjct: 378 YSLSQATLEQVFLELCKEQELG 399
>BC031026-1|AAH31026.1| 111|Homo sapiens ABCA10 protein protein.
Length = 111
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLEQ+FL+ K Q G
Sbjct: 70 YSLSQATLEQVFLELCKEQELG 91
>AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLEQ+FL+ K Q G
Sbjct: 1502 YSLSQATLEQVFLELCKEQELG 1523
>AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLEQ+FL+ K Q G
Sbjct: 1502 YSLSQATLEQVFLELCKEQELG 1523
>AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A10
protein.
Length = 1543
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLEQ+FL+ K Q G
Sbjct: 1502 YSLSQATLEQVFLELCKEQELG 1523
>BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein.
Length = 867
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 778 YSVSQTTLDNVFVNFAKKQSD 798
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLE++FL+ +K Q G
Sbjct: 1575 YSLSQCTLEKVFLELSKEQEVG 1596
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 2346 YSVSQTTLDNVFVNFAKKQSD 2366
>AL162060-1|CAB82398.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 284 YSVSQTTLDNVFVNFAKKQSD 304
>AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ39977 fis, clone SPLEN2029295, moderately
similar to ATP-binding cassette, sub-family A member 8.
).
Length = 815
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLE++FL+ +K Q G
Sbjct: 773 YSLSQCTLEKVFLELSKEQEVG 794
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLE++FL+ +K Q G
Sbjct: 1575 YSLSQCTLEKVFLELSKEQEVG 1596
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQREG 236
YS+SQ TLE++FL+ +K Q G
Sbjct: 1575 YSLSQCTLEKVFLELSKEQEVG 1596
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 2347 YSVSQTTLDNVFVNFAKKQSD 2367
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 2347 YSVSQTTLDNVFVNFAKKQSD 2367
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 2347 YSVSQTTLDNVFVNFAKKQSD 2367
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQRE 239
YS+SQTTL+ +F+ F K Q +
Sbjct: 1682 YSVSQTTLDNVFVNFAKKQSD 1702
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQR 242
+ +SQTTLE++F+ F K Q+
Sbjct: 2551 FLVSQTTLEEVFINFAKDQK 2570
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQR 242
+ +SQTTLE++F+ F K Q+
Sbjct: 2233 FLVSQTTLEEVFINFAKDQK 2252
>AL080207-1|CAB45776.1| 196|Homo sapiens hypothetical protein
protein.
Length = 196
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQR 242
+ +SQTTLE++F+ F K Q+
Sbjct: 152 FLVSQTTLEEVFINFAKDQK 171
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQR 242
+ +SQTTLE++F+ F K Q+
Sbjct: 2303 FLVSQTTLEEVFINFAKDQK 2322
>AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member 7
protein.
Length = 2146
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
+S+SQT LE++FL F+K Q
Sbjct: 2086 FSVSQTMLEEVFLYFSKDQ 2104
>AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7
protein.
Length = 2146
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
+S+SQT LE++FL F+K Q
Sbjct: 2086 FSVSQTMLEEVFLYFSKDQ 2104
>AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transporter
protein.
Length = 2146
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
+S+SQT LE++FL F+K Q
Sbjct: 2086 FSVSQTMLEEVFLYFSKDQ 2104
>AC114780-1|AAY24230.1| 182|Homo sapiens unknown protein.
Length = 182
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQR 242
+ +SQTTLE++F+ F K Q+
Sbjct: 138 FLVSQTTLEEVFINFAKDQK 157
>AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein.
Length = 2008
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
+S+SQT LE++FL F+K Q
Sbjct: 1948 FSVSQTMLEEVFLYFSKDQ 1966
>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
YS+SQ +LEQ+FL F Q
Sbjct: 1678 YSVSQISLEQVFLSFAHLQ 1696
>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
YS+SQ +LEQ+FL F Q
Sbjct: 1678 YSVSQISLEQVFLSFAHLQ 1696
>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), member 3 protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
YS+SQ +LEQ+FL F Q
Sbjct: 1678 YSVSQISLEQVFLSFAHLQ 1696
>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
protein.
Length = 1708
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
YS+SQ +LEQ+FL F Q
Sbjct: 1682 YSVSQISLEQVFLSFAHLQ 1700
>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
specific ATP-binding cassette protein protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 301 YSISQTTLEQIFLQFTKYQ 245
YS+SQ +LEQ+FL F Q
Sbjct: 1678 YSVSQISLEQVFLSFAHLQ 1696
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,842,256
Number of Sequences: 237096
Number of extensions: 781868
Number of successful extensions: 1084
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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