Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_E05
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 185 4e-47
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 183 1e-46
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 183 1e-46
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 183 2e-46
03_01_0034 + 318432-318825,318902-319851 182 2e-46
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 182 3e-46
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 181 7e-46
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 176 2e-44
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 75 7e-14
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 75 9e-14
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 74 1e-13
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 73 3e-13
02_05_1127 + 34292894-34293284,34293948-34295443 29 3.4
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 5.9
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 28 7.8
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 7.8
02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475 28 7.8
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 185 bits (450), Expect = 4e-47
Identities = 81/90 (90%), Positives = 89/90 (98%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 183 bits (446), Expect = 1e-46
Identities = 81/90 (90%), Positives = 88/90 (97%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 357 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 416
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 417 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 183 bits (446), Expect = 1e-46
Identities = 81/90 (90%), Positives = 88/90 (97%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 183 bits (445), Expect = 2e-46
Identities = 80/90 (88%), Positives = 88/90 (97%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 516 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 575
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 576 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 605
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 182 bits (444), Expect = 2e-46
Identities = 81/90 (90%), Positives = 87/90 (96%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 182 bits (443), Expect = 3e-46
Identities = 80/90 (88%), Positives = 88/90 (97%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 181 bits (440), Expect = 7e-46
Identities = 80/90 (88%), Positives = 88/90 (97%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 176 bits (428), Expect = 2e-44
Identities = 77/90 (85%), Positives = 86/90 (95%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 637
K SSYFVEWIPNNVK++VCDIPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 352 KNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 411
Query: 636 HWYTGEGMDEMEFTEAESNMNDLVSEYQQY 547
HWYT EGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 412 HWYTSEGMDEMEFTEAESNMNDLVAEYQQY 441
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Frame = -3
Query: 801 FVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRK 646
FV+W P K + PP + + A I N+TA+ E+F RI +F M+ ++
Sbjct: 424 FVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKR 483
Query: 645 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 550
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 484 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 74.5 bits (175), Expect = 9e-14
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 661
K + FV+W P K + PP ++ A I N+TA+ E+F RI +F
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 660 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 550
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 661
K + FV+W P K + PP ++ A I NST++ E+F RI +F
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDL 397
Query: 660 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 550
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Frame = -3
Query: 816 KXSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 661
K + FV+W P K + PP ++ A I NST++ E+F RI +F
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDL 397
Query: 660 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 550
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 510 RQTLRPRRRWPPGTVGTQRQG 572
R T +P+RRWPPG+ G +G
Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 563 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 685
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 769 RRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 674
RR H +W +G H R+ H H H G
Sbjct: 565 RRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRG 596
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 584 LSASVNSISSMPSPVYQCKKALRLNIAVN 670
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475
Length = 392
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 554 WYSETRSFMLLSASVNSISS---MPSPVYQCKKALRLNIAVNCSEMRL 688
W T+ ++ L+ +V + SS M P+ C K+LRL + SE L
Sbjct: 138 WTMRTKQYLELAVAVLASSSSGDMMIPITSCLKSLRLRDCIKISEKGL 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,413,765
Number of Sequences: 37544
Number of extensions: 352521
Number of successful extensions: 944
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -