Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_E02
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   3.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.5  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    20   7.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    20   7.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   9.6  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 168 GLSNNTWLFNLSRTFP 215
           GLS+  W++  S T P
Sbjct: 542 GLSHGNWIYPASMTIP 557


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 261 RKDPVAAKPRRRSGPKEKFVTS*TTRC 181
           R  P++ K   RSG +E+F+     RC
Sbjct: 79  RYQPISYKWITRSGTREQFIDM-VARC 104



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 226 SSSWLCRHR 252
           S+ W+C HR
Sbjct: 375 SNGWICEHR 383


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 5   PAHVCWTPCLMRPFSL 52
           P+  C+  CL+  FSL
Sbjct: 68  PSITCYMYCLLEAFSL 83


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 5   PAHVCWTPCLMRPFSL 52
           P+  C+  CL+  FSL
Sbjct: 68  PSITCYMYCLLEAFSL 83


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 298 PSRPSWAASLNWKA 339
           P    WA +++WKA
Sbjct: 93  PLEIGWAITVSWKA 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,255
Number of Sequences: 438
Number of extensions: 2028
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)