Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_E01
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 97 8e-21
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 97 8e-21
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 31 0.77
U88165-5|AAK21392.1| 393|Caenorhabditis elegans Downstream of m... 30 1.8
U34893-1|AAB01720.1| 393|Caenorhabditis elegans DOM-3 protein. 30 1.8
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 29 4.1
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 29 4.1
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132898-8|CAB60959.1| 297|Caenorhabditis elegans Hypothetical ... 28 7.2
Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical pr... 27 9.5
U23484-6|AAK93845.1| 641|Caenorhabditis elegans Pink (pten-indu... 27 9.5
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 9.5
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 9.5
AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc... 27 9.5
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 27 9.5
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 97.5 bits (232), Expect = 8e-21
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -2
Query: 686 QXDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAA 507
Q NPAYKG W+HPEI+NPEYTPD LY + A+G DLWQVKSGTIFD+ +ITD
Sbjct: 274 QIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIITDSVEE 333
Query: 506 AK-ERGEVIKKRQ--EGEKKMKSEQ 441
A+ E K + E EKK K+++
Sbjct: 334 AEAHAAETFDKLKTVEKEKKEKADE 358
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 97.5 bits (232), Expect = 8e-21
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -2
Query: 686 QXDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAA 507
Q NPAYKG W+HPEI+NPEYTPD LY + A+G DLWQVKSGTIFD+ +ITD
Sbjct: 274 QIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIITDSVEE 333
Query: 506 AK-ERGEVIKKRQ--EGEKKMKSEQ 441
A+ E K + E EKK K+++
Sbjct: 334 AEAHAAETFDKLKTVEKEKKEKADE 358
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 677 NPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLIT---DDPAA 507
NPA+KG W IDNP Y I AVG+++W + +FD+ LIT +D +
Sbjct: 382 NPAFKGKWTARLIDNPNYFEPKPFAGLAPITAVGIEMWTMSENILFDNILITSSEEDSSD 441
Query: 506 AKERGEVIKKRQE 468
++ +K+++E
Sbjct: 442 VAKQTFYVKQKEE 454
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -2
Query: 647 PEIDNPEYTPDSNLYKRDEICAV---GLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKK 477
P++ +P+Y N+ D++ V L V + D+ + +E GE KK
Sbjct: 271 PDVTHPDYIVSQNVQTNDQLMCVYMGSLVRSVVALHNLIDNKISLQKAEKEQETGEAEKK 330
Query: 476 RQEGEKKMKSEQ 441
+ E +KK K ++
Sbjct: 331 KDEKDKKDKKDE 342
>U88165-5|AAK21392.1| 393|Caenorhabditis elegans Downstream of mes
(in same operon)protein 3 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 5 SIHVPAHGASPITKH*XITYIN---SERNPHLHGHQYETTDTYLLTHNMSLRIGKIRAKH 175
S H+P P+ I + N RNP Q + Y + ++ L++G++RAK
Sbjct: 26 SKHIPKITGQPLPNEVQIPFDNMIYETRNPPKFEKQAKFISEYCINYDRKLQLGRMRAKK 85
Query: 176 TH 181
H
Sbjct: 86 FH 87
>U34893-1|AAB01720.1| 393|Caenorhabditis elegans DOM-3 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 5 SIHVPAHGASPITKH*XITYIN---SERNPHLHGHQYETTDTYLLTHNMSLRIGKIRAKH 175
S H+P P+ I + N RNP Q + Y + ++ L++G++RAK
Sbjct: 26 SKHIPKITGQPLPNEVQIPFDNMIYETRNPPKFEKQAKFISEYCINYDRKLQLGRMRAKK 85
Query: 176 TH 181
H
Sbjct: 86 FH 87
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 153 SVKFEPNTRTVLKTNDNSIGIVEDCA-MRGFKRRILHARTLRTPRYSM---SWHSLIIHN 320
+V P+ RT+ TN+N I V A R F+R + T S+ +W SL N
Sbjct: 857 TVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFVTGMQSILQPTWLSLFAPN 916
Query: 321 SLQLIV 338
LQ ++
Sbjct: 917 DLQCLI 922
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 153 SVKFEPNTRTVLKTNDNSIGIVEDCA-MRGFKRRILHARTLRTPRYSM---SWHSLIIHN 320
+V P+ RT+ TN+N I V A R F+R + T S+ +W SL N
Sbjct: 445 TVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFVTGMQSILQPTWLSLFAPN 504
Query: 321 SLQLIV 338
LQ ++
Sbjct: 505 DLQCLI 510
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 551 GTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMK 450
G D+ D+ A KER E++KKR+E K+ +
Sbjct: 654 GADSDESNSEDEEAEEKERQEILKKREEDLKRRR 687
>AL132898-8|CAB60959.1| 297|Caenorhabditis elegans Hypothetical
protein Y59A8B.11 protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -3
Query: 295 DIEYLGVRSVRAWRILLLKPLIAQSSTIPILLSFVFSTVRVFGSNF 158
D YL V R +LLK + +S I F VRVF NF
Sbjct: 221 DTAYLSVADAVKIRDILLKSTVFESGIITSRNIFSVGVVRVFNPNF 266
>Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical
protein F34D10.5 protein.
Length = 280
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 652 SIPKSTTQSTLLIQTCTSETKSALSVSICGK 560
SIP ST + LI + E + +L+ ICGK
Sbjct: 110 SIPCSTVSPSSLISSSKDEFQDSLTCHICGK 140
>U23484-6|AAK93845.1| 641|Caenorhabditis elegans Pink (pten-induced
kinase) homologprotein 1 protein.
Length = 641
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 27 VPAR*QNIKXLHTSILSVIPIYTDISTKQRTHIYLHTTCPYESVKFEPNTRTVL 188
+PA+ N+ + T+ + + + D +R LHT YES+ EP T V+
Sbjct: 242 LPAKHPNVVRIQTAFIDSLKVLPDAI--ERYPDALHTARWYESIASEPKTMYVV 293
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 557 KSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMKSEQ 441
K+G FDDFL DD + + G + +E E MKS++
Sbjct: 1175 KNGKKFDDFLNDDDDDSENDVGGGSEDDEEEEIVMKSKR 1213
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 557 KSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMKSEQ 441
K+G FDDFL DD + + G + +E E MKS++
Sbjct: 1175 KNGKKFDDFLNDDDDDSENDVGGGSEDDEEEEIVMKSKR 1213
>AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc
finger transcriptionfactor protein.
Length = 280
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 652 SIPKSTTQSTLLIQTCTSETKSALSVSICGK 560
SIP ST + LI + E + +L+ ICGK
Sbjct: 110 SIPCSTVSPSSLISSSKDEFQDSLTCHICGK 140
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 515 PAAAKERGEVIKKRQEGEKKMKSEQ 441
P K+ E++KKRQE ++ K E+
Sbjct: 191 PELQKQMDEIVKKRQEKSRRFKKEK 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,507,967
Number of Sequences: 27780
Number of extensions: 263132
Number of successful extensions: 857
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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