Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_D17
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U50307-4|AAA92305.1|  413|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81528-5|CAB04287.1|  698|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical
           protein F55C5.2 protein.
          Length = 296

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 614 NNRISESCFSSILNSSENVTSITNLNIPYCCDLKTQVDESMYXK 745
           +N    S  S  +N  + +  +T LN+P+  D+ ++VD  M+ K
Sbjct: 252 SNEKGFSVISWTVNDEDYMRILTKLNVPFLTDIGSEVDRKMFMK 295


>U50307-4|AAA92305.1|  413|Caenorhabditis elegans Hypothetical
           protein F43H9.3 protein.
          Length = 413

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 599 CNVLVNNRISESCFSSILNSSENVTSITNLNIPYCCDLKTQVDESM 736
           C VL  +  S  C S   +S+ENV  I+NL  PY   +K +  E +
Sbjct: 10  CRVLQQSFASSECISHPSSSNENVKPISNL--PYVDYIKKKYPEKL 53


>Z81528-5|CAB04287.1|  698|Caenorhabditis elegans Hypothetical
           protein F35E2.6 protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 650 LNSSENVTSITNLNIPYC 703
           LN+  N+  I NLN+PYC
Sbjct: 430 LNNDWNIHDIQNLNVPYC 447


>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 614 NNRIS--ESCFSSILNSSENVTSITNLNIPYCCDLKT 718
           +NR++  + C S+  +SSE +   +NL+ P+ C LKT
Sbjct: 656 SNRVACYQFCQSASCSSSEVIYQPSNLDEPFDCSLKT 692


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,145
Number of Sequences: 27780
Number of extensions: 259151
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)