Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_D16
         (871 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    27   0.74 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    26   1.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.9  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 0.74
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 93  ILFSMWILFRLCLSHPSHPYP 155
           ++F +W+ F L +S P  PYP
Sbjct: 317 VVFLIWLPFILRMSRPGEPYP 337


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 733 PSFDHLCQHTKWERHIDWGKSPCVC 659
           PS+D LCQ      H+D G    VC
Sbjct: 333 PSYDRLCQQCHKALHLDIGLRCVVC 357


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 834  VNTDEKELVKLAXRLKKEK 778
            VNTDEK+   L  RL K+K
Sbjct: 969  VNTDEKDSFVLGYRLVKKK 987


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,293
Number of Sequences: 2352
Number of extensions: 14624
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)