Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_D12
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 254 4e-68
04_01_0103 + 1082077-1082167,1083037-1085477 252 2e-67
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 227 6e-60
01_06_0662 + 30987187-30987277,30987825-30990214 218 5e-57
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 176 1e-44
03_05_0511 + 25056018-25059107 104 9e-23
02_04_0148 - 20198407-20201424 95 6e-20
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 52 4e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 49 5e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 38 0.012
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 37 0.020
01_04_0109 + 16112581-16112934 32 0.44
04_01_0330 - 4369326-4370852 30 2.4
09_06_0142 - 21107878-21109104 28 7.2
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 254 bits (623), Expect = 4e-68
Identities = 115/177 (64%), Positives = 139/177 (78%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 592
GFQWA KEG +AEEN+RG+ F DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+
Sbjct: 667 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLL 726
Query: 591 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 412
EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR
Sbjct: 727 EPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLR 786
Query: 411 SNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 241
+ T GQAFPQCVFDHW ++ DP E S+ +VQ+ RKRKGLKE + L+ + DKL
Sbjct: 787 AATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFEDKL 843
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 252 bits (617), Expect = 2e-67
Identities = 114/177 (64%), Positives = 138/177 (77%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 592
GFQWA KEG +AEEN+RG+ F DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+
Sbjct: 667 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLL 726
Query: 591 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 412
EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR
Sbjct: 727 EPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLR 786
Query: 411 SNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 241
+ T GQAFPQCVFDHW ++ DP E S+ +V + RKRKGLKE + L+ + DKL
Sbjct: 787 AATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFEDKL 843
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 227 bits (556), Expect = 6e-60
Identities = 103/177 (58%), Positives = 129/177 (72%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 592
GFQWA KEG +AEEN+RGV F DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLM
Sbjct: 677 GFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLM 736
Query: 591 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 412
EP+Y +IQ P+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF FT LR
Sbjct: 737 EPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDFTEKLR 796
Query: 411 SNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 241
+ T GQAFPQC+F HWQ + DP + S+ V+ + RKRKGLK+ + L+ Y DKL
Sbjct: 797 AETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKDIITPLSDYEDKL 853
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 218 bits (532), Expect = 5e-57
Identities = 101/151 (66%), Positives = 120/151 (79%), Gaps = 2/151 (1%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRG--VRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 598
GFQWA KEG +AEEN+RG + F DV LH+DAIHRGGGQIIPT RR +YA LTA+PR
Sbjct: 663 GFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPR 722
Query: 597 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 418
L+EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESFGFT+
Sbjct: 723 LLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFTST 782
Query: 417 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 325
LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 783 LRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 176 bits (429), Expect = 1e-44
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 12/188 (6%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 592
GFQW +EG + +E +R V+F + + + +HRGGGQIIPT RR +Y+ L A PRLM
Sbjct: 793 GFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLM 852
Query: 591 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 412
EPVY EIQ P V IY VL+RRRGHV + GTP+++VKA+LPV ESFGF DLR
Sbjct: 853 EPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESFGFETDLR 912
Query: 411 SNTGGQAFPQCVFDHWQVLPGD---------PCEP---QSKPYNVVQETRKRKGLKEGLP 268
+T GQAF VFDHW ++PGD P EP Q + +TR+RKG+ E +
Sbjct: 913 YHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDV- 971
Query: 267 DLTQYLDK 244
+ ++ D+
Sbjct: 972 SINKFFDE 979
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 104 bits (249), Expect = 9e-23
Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRF--NXYDVTLHTDAIHRG------GGQIIPTTRRCLYACL 616
GFQ A G + +E + G+ F Y H+DA + GQ+I + +
Sbjct: 822 GFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVKEACREAV 881
Query: 615 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNES 436
+ +PRL+E +Y CE+ P +G Y VL+R+R V +E GT +F V AYLPV ES
Sbjct: 882 VQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAES 941
Query: 435 FGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 343
GF+ +LRS T G A V HW+ +P DP
Sbjct: 942 VGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 95.1 bits (226), Expect = 6e-20
Identities = 45/106 (42%), Positives = 59/106 (55%)
Frame = -2
Query: 660 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 481
GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +E G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902
Query: 480 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 343
T +F V AYL V ES F+ LR+ T G A F HW+ +P DP
Sbjct: 903 TSLFTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/89 (34%), Positives = 46/89 (51%)
Frame = -2
Query: 618 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNE 439
L A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAE 702
Query: 438 SFGFTADLRSNTGGQAFPQCVFDHWQVLP 352
F + + LR T G+A + V+P
Sbjct: 703 MFQYVSTLRGMTKGRASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = -2
Query: 771 GFQWAXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTTRRCLYA---CLLTAQP 601
GF+ A G + + +R + L A H + +YA C A+P
Sbjct: 617 GFKEACNSGSLIGHPVENIR-----IVLTDGASHAVDSSELAFKLASIYAFRQCYAAARP 671
Query: 600 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 421
++EPV E++ P G + G +N+R+G + Q +V ++P+N FG++
Sbjct: 672 VILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYST 729
Query: 420 DLRSNTGGQ 394
LRS T G+
Sbjct: 730 ALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -2
Query: 612 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 433
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 432 GFTADLRSNTGGQAFPQCVFDHWQVLPGD 346
G + + + G A +FD + GD
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYGPWAGD 585
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 440 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 285
S S +P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>01_04_0109 + 16112581-16112934
Length = 117
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 443 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 288
M+ VL P + +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 1 MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 644 VGMIWPPPLWMASVWSVTS 700
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>09_06_0142 - 21107878-21109104
Length = 408
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 319 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 438
V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,358,001
Number of Sequences: 37544
Number of extensions: 477491
Number of successful extensions: 1204
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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