Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_D11
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    32   0.026
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    26   1.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   5.3  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    24   5.3  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   7.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   7.0  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   7.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   7.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   7.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.2  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 31.9 bits (69), Expect = 0.026
 Identities = 23/68 (33%), Positives = 29/68 (42%)
 Frame = -3

Query: 781 GGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGNAEELASEYLTQYNTGQKAKPVVSFI 602
           G D  NGTD +  L     +P  +G   I    G   E A  +   YN GQK +P    +
Sbjct: 178 GRDGCNGTDGLPGLSGLPGNPGPRGYAGIPGTKGEKGEPA-RHPENYNKGQKGEPGNDGL 236

Query: 601 AGLTAPPG 578
            GL  P G
Sbjct: 237 EGLPGPQG 244


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 196 IKHCYIKLNLVDICMYEIKYYIFMKISICLRNRKITIQDKL*QQSKINNSNIVTKTLYK- 372
           + HCY+K  L  + MY+ K   F   ++ +++       ++ + SK+N       +L   
Sbjct: 66  VTHCYVKCTLAGLQMYDEKTNTFKPETVPVQHEAYKSFTEV-ESSKVNELQQALSSLNAG 124

Query: 373 SGST*RVY 396
           SGS   V+
Sbjct: 125 SGSCAEVF 132


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +1

Query: 304 IQDKL*QQSKINNSNIVTKTLYKSGST*RVYTFLRNVKF 420
           +Q +L Q+S++ +SN+ + T  ++    ++   L  VKF
Sbjct: 78  LQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKF 116


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 241 TYIYQPD*VLYNNA 200
           T +++PD VLYNNA
Sbjct: 116 TIVWRPDVVLYNNA 129


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 732 SSRILRPRASSSLVKLVEMLK 670
           S R+LRPRA S  +  V+ LK
Sbjct: 32  SGRVLRPRARSVSLNRVDALK 52


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 361 F*LLYCYYLFSIVVTICLVL 302
           F L +C++LF IV+ + L+L
Sbjct: 708 FWLFHCHFLFHIVIGMNLIL 727


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 238 YIYQPD*VLYNNA 200
           +I++PD VLYNNA
Sbjct: 108 HIWRPDIVLYNNA 120


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 238 YIYQPD*VLYNNA 200
           +I++PD VLYNNA
Sbjct: 108 HIWRPDIVLYNNA 120


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 238 YIYQPD*VLYNNA 200
           +I++PD VLYNNA
Sbjct: 104 HIWRPDIVLYNNA 116


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 570  IRRPGGAVKPAINDTTG 620
            + RPGGA++  + D  G
Sbjct: 1842 VERPGGAIRATVEDKRG 1858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,125
Number of Sequences: 2352
Number of extensions: 17306
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)