Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_D08
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 55 5e-08
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 52 4e-07
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 51 1e-06
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 48 1e-05
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 43 3e-04
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 42 5e-04
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 40 0.002
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 30 2.3
08_01_0388 + 3432177-3433154 29 3.0
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 29 4.0
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 29 4.0
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 28 6.9
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 28 6.9
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 28 6.9
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 28 6.9
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 28 9.2
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 28 9.2
07_03_1662 + 28447419-28447666,28448429-28448573 28 9.2
03_06_0273 + 32787021-32787434,32788096-32788221,32788305-327883... 28 9.2
01_01_0691 - 5328169-5328228,5328300-5328488,5328611-5328768,532... 28 9.2
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 55.2 bits (127), Expect = 5e-08
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Frame = -2
Query: 525 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 346
F L +L P S G + L++++P P + YF DL+ +E VI S F
Sbjct: 420 FILEKILGPVSSGHVELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSN 479
Query: 345 LK--SQVVDLKVTQCRQWPFG-------SHEYWACYALNLASTQYHTVGTCAMGDKHIGV 193
+ V+ T +P Y ++ T +H G C +G V
Sbjct: 480 FTYANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVG----AV 535
Query: 192 VDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 85
VD RV GV GLRV+D+S N A V+M+
Sbjct: 536 VDDDYRVFGVQGLRVIDSSTFKYSPGTNPQATVMML 571
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 52.4 bits (120), Expect = 4e-07
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Frame = -2
Query: 525 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 346
F L +L P S G ++L+S++P+ P + YF + D++ R +E V+ S F
Sbjct: 416 FILEKILGPMSTGHVALRSADPDANPAVTFNYFRDPRDVERCVRGIETIERVVRSRAFAR 475
Query: 345 LK-SQVVDLKVT----QCRQWPFGSHEYWACYALNLASTQYHTVGTC--AMGDKHIG-VV 190
+ V ++ + P A L TV T G H+G VV
Sbjct: 476 FTYANVTAMEAAVLGRRAGHLPVNLLPRRATDTRPLQQYCRETVMTIWHYHGGCHVGAVV 535
Query: 189 DSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 85
D RV GV GLRVVD+S N A V+M+
Sbjct: 536 DQDYRVLGVRGLRVVDSSTFKYSPGTNPQATVMML 570
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 50.8 bits (116), Expect = 1e-06
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Frame = -2
Query: 525 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 346
F L +L P+S G+++L++ +P+D P + YF++ +DL A + VI S F
Sbjct: 409 FILEKVLGPQSTGRLALRNLDPDDNPTVSFNYFSHPDDLRRCAAGIATIERVIRSRAFSR 468
Query: 345 L--KSQVVDLKVTQCRQWPF------GSHEYWAC--YALNLASTQYHTVGTCAMGDKHIG 196
+ + ++P G + A + + T +H G C +G
Sbjct: 469 FAYPNFAFPATINVTAEFPANLMRMRGGSDPRALEQFCRDTVMTIWHYHGGCQVG----R 524
Query: 195 VVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 85
VVD RV G+ LRV+D S N A V+M+
Sbjct: 525 VVDRDYRVLGIEALRVIDGSTFNASPGTNPQATVMML 561
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 47.6 bits (108), Expect = 1e-05
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 9/173 (5%)
Frame = -2
Query: 525 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 346
F L +L P S G + L++ NP+D P + YF + DL + VI S F
Sbjct: 417 FILEKILGPLSTGHLELRNRNPDDNPSVTFNYFAHPEDLRRCVAGVSVIERVIRSEAFAN 476
Query: 345 LKSQV--VDLKVTQCRQWPFG---SHEYWAC----YALNLASTQYHTVGTCAMGDKHIGV 193
V+ + +P H+ + + + T +H G C + V
Sbjct: 477 FTYPYFSVETLLNMTAGFPVNLRPRHDNDSTSLEQFCKDTVMTIWHYHGGCQVN----RV 532
Query: 192 VDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMIKIDHGHLEN 34
VD+ RV GV LRV+D S N A V+M+ +KI + L N
Sbjct: 533 VDAEYRVIGVDALRVIDGSTFNASPGTNPQATVMMLGRYMG--VKIQNERLGN 583
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 42.7 bits (96), Expect = 3e-04
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Frame = -2
Query: 501 PESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKELKS----- 337
P S G ++L ++ + P + YF++ DL ++ ++ + F EL +
Sbjct: 421 PLSTGHLALIDTDVKKNPAVTFNYFSHPQDLTRCVYGIKTIERILKTNRFSELSANTDGH 480
Query: 336 ---QVVDLKVTQCRQWPFGSH----EYWACYALNLASTQYHTVGTCAMGDKHIGVVDSRL 178
+V+++ V Q H E + + T +H G C +G VVD +
Sbjct: 481 SMERVLNMSV-QANVNLIPKHTNDTESLEQFCRDTVITIWHYHGGCHVGK----VVDQQH 535
Query: 177 RVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMI 61
RV GV+G+RVVD S N A V+M+ MI
Sbjct: 536 RVLGVSGVRVVDGSTFSRSPGTNPQATVMMMGRYFGVMI 574
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 41.9 bits (94), Expect = 5e-04
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Frame = -2
Query: 525 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 346
F L + P S G + L ++ P + YF + DL ++ ++ + HF
Sbjct: 427 FILSKIDGPLSTGNLVLVDTDINSNPTVTFNYFQHPKDLSRCVYGIKTIERILKTNHFTN 486
Query: 345 LKSQ--------VVDLKVT-QCRQWPFGSHEYWAC--YALNLASTQYHTVGTCAMGDKHI 199
V+++ VT P +++ + + + T +H G C +G
Sbjct: 487 FTLNGGGYPMEVVLNMSVTANINLIPKHTNDSTSMEQFCRDTVVTIWHYHGGCHVGK--- 543
Query: 198 GVVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 85
VVD + RV GV+GLRV+D S + N A V+M+
Sbjct: 544 -VVDQQYRVIGVSGLRVIDGSTLFRSPGTNPQATVMMM 580
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 39.9 bits (89), Expect = 0.002
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 12/165 (7%)
Frame = -2
Query: 501 PESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKELKSQVVDL 322
P S G + L SSNP + P + Y + DL + V+ ST +S + L
Sbjct: 419 PLSEGSLWLTSSNPLESPSVRFNYLSRREDLARCVTGMRRVAKVLESTTMDVFRSAMGSL 478
Query: 321 KVTQCRQ------------WPFGSHEYWACYALNLASTQYHTVGTCAMGDKHIGVVDSRL 178
R+ W + +T +H G C G VVD
Sbjct: 479 SQDSRRREFRIVGAALPVDWRTNDTAL-GDFCQQTVATLWHYHGGCVAGS----VVDRDF 533
Query: 177 RVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMIKIDHGH 43
RV V LRVVD S N A ++M+ + ID H
Sbjct: 534 RVFRVRALRVVDGSTFRETPGTNPQATIMMMGRYIGQKM-IDERH 577
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 379 QHGHQQYTLQRTEVSSGRSKGDAMSAMAFWKSRVLGLLCP*FSQHTVP 236
Q G +++ +R ++SSGR G A + W S V P QH VP
Sbjct: 664 QSGDRRFHQKRNDMSSGRGHGHAWNNPPSWPSPVANGFVP--MQHGVP 709
>08_01_0388 + 3432177-3433154
Length = 325
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -2
Query: 660 PDYQVTATVSX-TASFLPVLMCSQMLMLSDDICIALSEAGLGQETVFSLITLLHPESR-G 487
PDYQV A+V AS L + + D+ + + QE V ++ P SR G
Sbjct: 62 PDYQVLASVVVWVASSLLLAPFAPSSATGGDVSVGRGDPLPEQEPVEEPVSDPAPTSRRG 121
Query: 486 KISLKSSNPEDPP 448
+ SSNP PP
Sbjct: 122 RRQSSSSNPTPPP 134
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 660 PDYQVTATVSXTASFLPVLMCSQMLMLSDDICIALSEAGLGQETVFSLITLLHPESRGKI 481
PD+Q TA +S F +++ S L L DDI + + GL V L HP GK+
Sbjct: 443 PDHQKTARLS---EFGEMILASFDL-LRDDILSSKTSNGLNVLFVRREDYLAHPRHSGKV 498
Query: 480 SLKSSNPED 454
+ SN ++
Sbjct: 499 ESRLSNEKE 507
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 237 HTVGTCAMG-DKHIGVVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMIA 82
H +G+C MG G VD+R L V D SV+PT N + +A
Sbjct: 721 HHMGSCRMGATAGDGAVDARGESWEAERLYVCDGSVLPTAVGVNPMITIQSVA 773
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 500 GCSSVISENTVSCPKPASDRAMHISSLNMSICEHISTGRNEAVXETVAVT**SGYDWDLF 679
G S ++ + S K A+D +HI+ +C NE V T DWDL
Sbjct: 153 GSSDSVTSDAGSA-KAAADDVVHIAHALCKVCAKSPKAVNEFVRRVSPATVGRSIDWDLV 211
Query: 680 KAT-KPKMSGTG 712
+ K +G G
Sbjct: 212 RDNDSSKATGLG 223
>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
Length = 794
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 162 SHRELLTSSLPPLYVYRPWR 221
S R L+SS PP+ ++ PWR
Sbjct: 768 SKRSWLSSSFPPILIWLPWR 787
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 189 LPPLYVYRPWRKSLRYGTV 245
LPP Y+ + W + RYGT+
Sbjct: 375 LPPHYILKRWTQEARYGTI 393
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -1
Query: 355 LQRTEVSSGRSKGDAMSAMAFWKSRVLGLLCP*FSQHTVPYRRDLRHGR*TYRG 194
L RT+ SSG S + S S V+G C F TVP LR T+ G
Sbjct: 503 LIRTKGSSGMSLAERFSLTLSRSSLVVGRSCVEFEPETVPLLSTLRGKPITFLG 556
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +2
Query: 488 PLDSGCSSVISENTVSCPKPASDRAMHISSLNMSICEHISTGRNEAVXETVA 643
P+ +S + + CP + +SS S +H++TG +E + VA
Sbjct: 519 PVSHNVTSDRDTSILGCPSVTASMTTQVSSKEESKAQHLTTGYSEVNKQLVA 570
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 387 ENFNTVINSTHFKELKSQVVDLKVTQ 310
E+ + ++NS HF+ L + + D KV Q
Sbjct: 295 EDLSRIVNSNHFRRLTNLIEDKKVAQ 320
>07_03_1662 + 28447419-28447666,28448429-28448573
Length = 130
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 530 VSCPKPASDRAMHISSLNMSICEHISTGRNEA--VXETVAVT 649
+ C KP D+ M I+SL + E I +A + ++V VT
Sbjct: 25 IDCSKPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVT 66
>03_06_0273 +
32787021-32787434,32788096-32788221,32788305-32788378,
32788468-32788537,32788622-32788677,32788762-32788833,
32788945-32789039,32789196-32789262,32789359-32789488,
32789578-32789793,32789887-32790017,32790719-32790893,
32790977-32791067,32792151-32792308,32792763-32792951,
32793066-32793125
Length = 707
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 141 RPPLEDLSHRELLTSSLPPLYVYRPWRKSLRYGTVCW 251
R P+++ + L TSS P +V W K+L ++C+
Sbjct: 667 RKPMDE-TQETLRTSSFPSNHVKEKWSKNLYIASICY 702
>01_01_0691 -
5328169-5328228,5328300-5328488,5328611-5328768,
5329677-5329767,5330359-5330438,5330472-5330533,
5330603-5330730,5331290-5331508,5331586-5331715,
5331804-5331870,5331968-5332062,5332150-5332221,
5332307-5332362,5332485-5332554,5332662-5332735,
5332820-5332954,5334135-5334314
Length = 621
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 156 DLSHRELLTSSLPPLYVYRPWRKSLRYGTVCW 251
D + L TS+ P +V W K+L G++C+
Sbjct: 585 DETQETLRTSAFPGQHVKEKWAKNLYLGSICY 616
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,214,677
Number of Sequences: 37544
Number of extensions: 416743
Number of successful extensions: 1061
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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