BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_D08
(754 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 1.9
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 4.4
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 24 4.4
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 24 5.8
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 24 5.8
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 25.4 bits (53), Expect = 1.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 474 KSSNPEDPPIIYSGYFTNENDL 409
K N E PP IYSG ++++L
Sbjct: 227 KMENIESPPSIYSGIIKHDDEL 248
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 24.2 bits (50), Expect = 4.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 537 QETVFSLITLLHPESRGKISLKSSNPEDP-PIIYSGY 430
+E V +LIT L P+S K L ++ P P I SGY
Sbjct: 662 EEAVMNLITNLQPDSEDK--LLNTMPASPASSIKSGY 696
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 24.2 bits (50), Expect = 4.4
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 518 SENTVSCPKP--ASDRAMHISSLNMSIC 595
S T + P+P A +MH+ +L +S+C
Sbjct: 164 SPRTTTTPEPPLADPNSMHLFALTLSVC 191
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.8 bits (49), Expect = 5.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 198 LYVYRPWRKSLRYGTVCW 251
+Y + PW+ SLR T+ W
Sbjct: 1086 VYGHHPWQASLRLKTMHW 1103
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.8 bits (49), Expect = 5.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 198 LYVYRPWRKSLRYGTVCW 251
+Y + PW+ SLR T+ W
Sbjct: 1086 VYGHHPWQASLRVKTMHW 1103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,223
Number of Sequences: 2352
Number of extensions: 16094
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -