Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_D05
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 364 e-102
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 361 e-101
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 148 1e-36
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 91 2e-19
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.30
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.53
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 2.1
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 8.7
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 25 8.7
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 364 bits (895), Expect = e-102
Identities = 166/222 (74%), Positives = 186/222 (83%)
Frame = -1
Query: 747 DIERPTYTNLNRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVXS 568
DIERPTY NLNR I Q+VSSITASLRF G+LNVDL EFQTNLVPYPRIHFPLVTY+P+ S
Sbjct: 222 DIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVS 281
Query: 567 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 388
A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK+
Sbjct: 282 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKS 341
Query: 387 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 208
+RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDL
Sbjct: 342 RRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDL 401
Query: 207 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMDS 82
MY+KRAFVHWYV EDLAALE+DYEEVG DS
Sbjct: 402 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 361 bits (887), Expect = e-101
Identities = 165/222 (74%), Positives = 185/222 (83%)
Frame = -1
Query: 747 DIERPTYTNLNRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVXS 568
DIERP+Y NLNR I Q+VSSITASLRF+G+LNVDL EFQTNLVPYPRIHFPLVTYAP+ S
Sbjct: 218 DIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVS 277
Query: 567 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 388
A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK
Sbjct: 278 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKA 337
Query: 387 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 208
KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDL 397
Query: 207 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMDS 82
MY+KRAFVHWYV EDLAALE+DYEEVG DS
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 148 bits (358), Expect = 1e-36
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 3/223 (1%)
Frame = -1
Query: 744 IERPTYTNLNRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVXSA 565
I+ P+Y +LN + +++ +T S RF G LN DL + N+VP+PR+HF +V +AP+ +
Sbjct: 217 IKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAI 276
Query: 564 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 385
+ + +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK
Sbjct: 277 GSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTK 336
Query: 384 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 205
+ FV+W P + PP DL + + + N+T+I E + RL +F M
Sbjct: 337 NSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAM 388
Query: 204 YAKRAFVHWYV---XXXXXXXXXXXXXEDLAALEKDYEEVGMD 85
+ ++AF+HWY DL + + Y+E G+D
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 90.6 bits (215), Expect = 2e-19
Identities = 50/193 (25%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Frame = -1
Query: 741 ERPTYTNLNRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVXS-- 568
+ PT+ N+ + ++S+ T +LR+ G +N DL +L+P PR HF L +Y P +
Sbjct: 221 QNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQ 280
Query: 567 -AEKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATI 394
E + +V ++ P NQMV +P + +++ + +G+ P DV+ ++ I
Sbjct: 281 VEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRI 340
Query: 393 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 214
+ +R F+ W P +V ++ + P + ++ + ML+N T+IA + R ++
Sbjct: 341 RERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQY 395
Query: 213 DLMYAKRAFVHWY 175
D + + AF+ Y
Sbjct: 396 DRLRKRNAFLEQY 408
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 440 VVTXYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 306
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.53
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = -2
Query: 647 TSPSSRLTWCLTPVSTSHWSRTRQSXLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPV 474
TS S L+ + +++ T S P PT+ S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 473 MASTWLAVCCTVVTXYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 318
++ CT T P T + S P +N +T S TS P
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 528 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 403
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 400 SDGRVHILGYXVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 543
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 236 GLALTTSSTSCTPSVLSCTGTSVRVWRRESXPKPVRTWLPS--RRITKKSAWTPLKARVR 63
G+ TS TS T S S++ S P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 62 EPKSTK 45
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 404 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 318
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 644 SPSSRLTWCLTPVSTSHWSRTRQSXLPRRPTMNSFPSPRSQTHASSP 504
SPS LT L S++ S + + + R+ T +S SP+ Q+ S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 641 PSSRLTWCLTPVSTSHWSRTRQSXLPRRPTMNSFPSPRSQTHASSPPTR 495
P+++ P S + T +S +P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 407 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 312
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 660 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVXSAEK 559
A +V++ E +TN +P HFP T ++E+
Sbjct: 368 AQSVEVPENETNQIPTTEEHFPATTEEVAPASEE 401
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,034,424
Number of Sequences: 5004
Number of extensions: 63733
Number of successful extensions: 224
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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