Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_D04
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0714 + 5339408-5340020,5340117-5340319,5340408-5340605,534...    29   3.0  
11_06_0186 + 21027581-21028825                                         29   3.9  
04_03_0653 - 18429736-18431379                                         29   3.9  
01_03_0127 + 12787664-12787907,12790660-12790715,12792203-127924...    29   3.9  
06_03_0746 - 24111579-24112348,24113164-24113256,24113355-241134...    28   6.9  
12_02_0785 + 23135764-23135973,23136061-23136713,23136822-231369...    28   9.1  

>02_01_0714 +
           5339408-5340020,5340117-5340319,5340408-5340605,
           5340703-5340774,5341197-5341292,5341828-5341907,
           5341993-5342068,5342152-5342362,5342562-5342755,
           5342834-5342939,5343037-5343126,5343470-5344206
          Length = 891

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 483 VSISGWGTKFSTYWYFGATESEESFSIAVGDFI 581
           VS  GWGTK+ ++W    T   ESFS  +GD I
Sbjct: 498 VSYHGWGTKYDSFWCCYGT-GIESFS-KLGDSI 528


>11_06_0186 + 21027581-21028825
          Length = 414

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = +3

Query: 435 PIDAQEILLAIV-----VRPVVSISGWGTKFSTYWYFGATESEESFSIAVGDFIRPF 590
           PI  ++I LA V     V+P+   SG   K+   WY G     +S SI   D +R F
Sbjct: 110 PITGKQIALAPVTTIEQVKPIFDDSGAVHKYKYSWYTGQMTVSDSPSILAPDELRNF 166


>04_03_0653 - 18429736-18431379
          Length = 547

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 179 RNSLISNHFNVPSARLNFYSLMTVFVLADTH 271
           R+  +SN F  P + L  Y+ +T  VL DTH
Sbjct: 207 RSLAVSNCFLPPPSELRHYAALTKLVLQDTH 237


>01_03_0127 +
           12787664-12787907,12790660-12790715,12792203-12792473,
           12792600-12792832
          Length = 267

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 743 PQPTXLCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAF 612
           P P+  C  +   F  GD+   +G      G+GY F  P+G AF
Sbjct: 22  PSPSASCARRPVVFAFGDSNTDTG--GIAAGMGYYFPLPEGRAF 63


>06_03_0746 -
           24111579-24112348,24113164-24113256,24113355-24113460,
           24113587-24113783,24113893-24114103,24114198-24114273,
           24114347-24114426,24114659-24114754,24114894-24114965,
           24115067-24115264,24115273-24115569
          Length = 731

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 483 VSISGWGTKFSTYWYFGATESEESFSIAVGDFI 581
           VS  GWGT+++++W    T   ESFS  +GD I
Sbjct: 325 VSYHGWGTQYNSFWCCYGT-GIESFS-KLGDSI 355


>12_02_0785 +
           23135764-23135973,23136061-23136713,23136822-23136903,
           23137031-23137113,23137229-23137361,23137493-23137664,
           23137929-23138656
          Length = 686

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 603 LRIESQSVGTYKIVAYTVHAVSESAAIAGVA*FEVSELMGTQXCR 737
           L+ + Q+ G  +  AY  HA+S+   I G+  F     M    CR
Sbjct: 545 LQYQQQTDGFEESYAYLEHAISQMGNIDGILGFSQGAAMAALFCR 589


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,339,725
Number of Sequences: 37544
Number of extensions: 366473
Number of successful extensions: 810
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)