Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_C18
(421 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.46
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 4.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 4.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 4.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 4.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 4.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 4.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 5.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 5.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 9.9
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.6 bits (51), Expect = 0.46
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 177 IHNVNTCDSFSYNTDLGQFRSNSTSNF 257
IHN N ++ +YN + + +N+ +N+
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNNNYNNY 349
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.3
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQE 30
R Y H + + L K+Y R KK+ + K+ K RD++
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.3
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQE 30
R Y H + + L K+Y R KK+ + K+ K RD++
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 4.3
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQE 30
R Y H + + L K+Y R KK+ + K+ K RD++
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.3
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQE 30
R Y H + + L K+Y R KK+ + K+ K RD++
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 4.3
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERD-QERNLS 18
R Y H + K L K+Y R +K+ + K+ K RD +ER S
Sbjct: 250 RRYEKLHNEKKKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRRERGRS 309
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 4.3
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQE 30
R Y H + + L K+Y R KK+ + K+ K RD++
Sbjct: 250 RRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 304
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.6
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 194 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQ-ERNLS 18
R Y H + + L K+Y R +K+ + K+ + K RD+ ER S
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRERSKERSRDRTERERS 76
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 167 MKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHE 63
+K +++ K K + DL AKK R++ LT HE
Sbjct: 736 VKSTIQSLMKLKSPEWKDL-AKKARSVNHLLTHHE 769
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 318 KGAIQTA*GAKDRINKSS 265
KG+I GA+D NK++
Sbjct: 190 KGSISNIDGAEDHCNKTA 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,148
Number of Sequences: 438
Number of extensions: 1626
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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