Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C14
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1008 + 26873805-26873891,26874038-26874107,26874237-268743...    29   4.5  

>06_03_1008 +
           26873805-26873891,26874038-26874107,26874237-26874334,
           26874505-26874643,26874778-26874860,26875145-26875195,
           26875305-26875370,26875465-26875530,26875637-26875717,
           26876042-26876119,26876218-26876394,26876467-26876545,
           26876752-26876870,26877029-26877430
          Length = 531

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 578 YR-VILLCPAFVADKEPXNERIDGXLIFKHSMKR-KLVRLHNNNXKPK 441
           YR  IL  P F  D  P +ER++   I K+ ++  +LV+L   + KP+
Sbjct: 114 YRGTILQIPQFKDDSSPLDERVECFRILKYDVEADRLVKLPQASGKPE 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,457,068
Number of Sequences: 37544
Number of extensions: 256340
Number of successful extensions: 447
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)