Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C14
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    28   9.3  
U64858-6|AAB18283.2|  392|Caenorhabditis elegans Hypothetical pr...    28   9.3  
AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -3

Query: 682 CCYNTI---CKNDSDIIVLEFYKTGIPLRYFP 596
           CC   I   C +++D+    F KTGIP  YFP
Sbjct: 280 CCGQGIKFKCTSNADVKFEYFPKTGIPTCYFP 311


>U64858-6|AAB18283.2|  392|Caenorhabditis elegans Hypothetical
           protein C16D9.5 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 60  RKSKNILFKNKSLTKNTFT-TNHSLISFFFLISNLKXVRNIINWNNFYSTKINTVQF*NS 236
           + SKN++F + ++++N F    HS+ S +    N K +   +  N FY+  I   QF N 
Sbjct: 139 KNSKNMVFVS-AVSENHFNEATHSIGSVYKFYHNAKFILYSLGLNKFYTQTIKK-QFSNL 196

Query: 237 E 239
           E
Sbjct: 197 E 197


>AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical
           protein C18G1.7 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 475 LSDCIIITKNQNICTSIVLFCK 410
           L++CI   K  NIC S V FCK
Sbjct: 411 LNECIEEIKAANICRSTVTFCK 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,245,848
Number of Sequences: 27780
Number of extensions: 286520
Number of successful extensions: 614
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)