Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C08
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...    89   2e-18
Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical ...    29   2.6  

>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
 Frame = -1

Query: 630 VDRRFGFYQQYFDLSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKDEEIKMLLL 451
           +D R G+ QQ F LS K  R +   +P++I +    ++       +E+ F   ++KML++
Sbjct: 259 IDSRLGWLQQQFKLSAKATREIIVKEPRIIMFGTGPIERLVKMFNKELNFTTNQLKMLVM 318

Query: 450 NKPKLWMINQRMLIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQY 271
             P+++M++ +++ + + Y+ ++MKI + TILE+  +L   +  IK RH FL+ LGRA Y
Sbjct: 319 EDPRIFMMDSKLVSKTYKYVRDVMKINNETILEHPFILRCSLSVIKSRHDFLKRLGRANY 378

Query: 270 D--PKKVNYVPIKALVEKTDVEFCNNFAKCDIDDFNMFL 160
               KK + + I    E TD E  +    CD+     FL
Sbjct: 379 QLAEKKESKIDIS---EVTDPEGSSK-ESCDLVSLEHFL 413


>Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.11 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 137 IITVHKVFKNILKSSISH-FAKLLQNSTSVFST 232
           IITVHK ++N +K  IS    KL++  TSV  T
Sbjct: 311 IITVHKHYRNAVKHIISQCVGKLIKRDTSVRDT 343


>AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical
           protein Y54G11A.1 protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -1

Query: 339 LLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKALVEKTDVEFCNNF 196
           LLS++ R       + ++ + ++  KK+   P+++ VEK +  F  NF
Sbjct: 560 LLSKMPRNSHNFYIIDTVRKIEFYRKKMRCAPLRSTVEKIEFYFLKNF 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,186,808
Number of Sequences: 27780
Number of extensions: 295474
Number of successful extensions: 714
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)