Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_C08
(732 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.97
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 3.0
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 3.0
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 3.9
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 3.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.9
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 5.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 5.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 5.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.0
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.6 bits (51), Expect = 0.97
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -1
Query: 651 QAISTIRVDRRFGFYQQYFDLSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKD 475
+ I +++R + Y Y D K++ +T+PK T V NT K++ + D
Sbjct: 443 RTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDKSDWFD 501
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -1
Query: 519 KCNTFAIKEEMGFKDEEIKMLLLNKPKLWMI 427
+C+ + K++ D+ ++ L+ NKP++W++
Sbjct: 74 ECSPCSEKQKK-IADKVVQFLIDNKPEIWVL 103
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -1
Query: 519 KCNTFAIKEEMGFKDEEIKMLLLNKPKLWMI 427
+C+ + K++ D+ ++ L+ NKP++W++
Sbjct: 74 ECSPCSEKQKK-IADKVVQFLIDNKPEIWVL 103
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 8 ILLQTSVLSLE-ACLLVAGIFDALLYHSINAFE 103
IL + VL AC+L+ +FD + H N F+
Sbjct: 32 ILKEVCVLQANRACILIKDLFDNVHNHIQNIFK 64
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 8 ILLQTSVLSLE-ACLLVAGIFDALLYHSINAFE 103
IL + VL AC+L+ +FD + H N F+
Sbjct: 15 ILKEVCVLQANRACILIKDLFDNVHNHIQNIFK 47
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 394 YSQYNENSSHNNIRECW 344
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 468 IKMLLLNKPKLW 433
IK L+ NKP+LW
Sbjct: 91 IKFLVENKPELW 102
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 468 IKMLLLNKPKLW 433
IK L+ NKP+LW
Sbjct: 91 IKFLVENKPELW 102
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 468 IKMLLLNKPKLW 433
IK L+ NKP+LW
Sbjct: 91 IKFLVENKPELW 102
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 585 HLNQNIVDKIRI 620
H+NQN+ DK+ I
Sbjct: 177 HINQNMGDKVEI 188
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,594
Number of Sequences: 438
Number of extensions: 3550
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -