Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C04
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical...    49   8e-07
Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical p...    30   0.54 
AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty ...    30   0.54 
AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty...    30   0.54 
U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine re...    27   5.0  
Z92813-1|CAB07286.1|  393|Caenorhabditis elegans Hypothetical pr...    26   6.6  
Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...    26   8.7  
U51993-3|AAB36853.2|  958|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related...    26   8.7  
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical
           protein Y53F4B.14 protein.
          Length = 90

 Score = 49.2 bits (112), Expect = 8e-07
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -2

Query: 266 MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWV 162
           MG WKLE GR  +  +FPVG F+ FNQP  F+E++
Sbjct: 1   MGGWKLETGRFLLLITFPVGAFWLFNQPTIFKEFM 35


>Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical
           protein T13F2.1 protein.
          Length = 447

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +3

Query: 39  NLVHLDSXLCICFFLISCINFLNRFS----IMLVFWWEDLSFCIGYPFFKIFWLVE 194
           N+V  D  L +  F  +    LN +S    +M +F W+ + +    PF ++ WL++
Sbjct: 216 NVVGRDGDLDLVPFYATVAEHLNNYSQDSWVMTLFRWQHVHWTFMLPFLRLSWLLQ 271


>AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty
           acid desaturase protein.
          Length = 447

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +3

Query: 39  NLVHLDSXLCICFFLISCINFLNRFS----IMLVFWWEDLSFCIGYPFFKIFWLVE 194
           N+V  D  L +  F  +    LN +S    +M +F W+ + +    PF ++ WL++
Sbjct: 216 NVVGRDGDLDLVPFYATVAEHLNNYSQDSWVMTLFRWQHVHWTFMLPFLRLSWLLQ 271


>AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty
           acid desaturase protein.
          Length = 447

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +3

Query: 39  NLVHLDSXLCICFFLISCINFLNRFS----IMLVFWWEDLSFCIGYPFFKIFWLVE 194
           N+V  D  L +  F  +    LN +S    +M +F W+ + +    PF ++ WL++
Sbjct: 216 NVVGRDGDLDLVPFYATVAEHLNNYSQDSWVMTLFRWQHVHWTFMLPFLRLSWLLQ 271


>U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical
           protein C41G11.4b protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 111 FSIMLVFWWEDLSFCIGYPFFKIFWLVE-KKEQSNRKRCV 227
           FS  L  W   ++FC+G P F IF +V   + +S+R+  V
Sbjct: 16  FSYTLELWMYGIAFCVGLPAF-IFTVVRLARSRSSRQHLV 54


>U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical
           protein C41G11.4a protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 111 FSIMLVFWWEDLSFCIGYPFFKIFWLVE-KKEQSNRKRCV 227
           FS  L  W   ++FC+G P F IF +V   + +S+R+  V
Sbjct: 16  FSYTLELWMYGIAFCVGLPAF-IFTVVRLARSRSSRQHLV 54


>U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical
           protein C41G11.4c protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 111 FSIMLVFWWEDLSFCIGYPFFKIFWLVE-KKEQSNRKRCV 227
           FS  L  W   ++FC+G P F IF +V   + +S+R+  V
Sbjct: 16  FSYTLELWMYGIAFCVGLPAF-IFTVVRLARSRSSRQHLV 54


>AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical
           protein E03H12.3 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +3

Query: 51  LDSXLCICFFLISCINFLNRFSIMLVFWW---EDLSFC 155
           L      CFF+IS I  LN    ML+FW     D  FC
Sbjct: 27  LSMFFSFCFFIISIILELNASVNMLLFWGYPASDTKFC 64


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 215 PVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDRE 111
           P G  FF N    F  W TN  +  +P  N ++ +
Sbjct: 571 PFGSNFFNNNYNSFNNWYTNKNKNYYPYSNSNNNK 605


>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 136 HQKTNMIEKRFKKLIQDMR-KKQMQXLESK*TKFINNII 23
           HQ+  MIEK  K ++QDM+  K +  + +     + N+I
Sbjct: 608 HQRYKMIEKDTKMIVQDMKLSKALSVINAGKRLTLENVI 646


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein
            ZK593.5 protein.
          Length = 1326

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 148  DKSSHQKTNMIEKRFKKLIQDMRKKQMQXLES 53
            DK+   K   +E++  +++ D R+KQ++  ES
Sbjct: 1070 DKAEGDKVKHLEEKINQMVADHRRKQIEYDES 1101


>AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine
           receptor, class w protein8 protein.
          Length = 330

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 237 DGYVHIVSCWIVLFFQPTKIF*RMGNQYKKTNLPTRKPT 121
           DGY+ +V C++ +    T IF     + ++ NL   K T
Sbjct: 222 DGYIAMVVCFLYIIVAGTLIFQLQKAKQRRKNLKAEKST 260


>Z92813-1|CAB07286.1|  393|Caenorhabditis elegans Hypothetical
           protein T28A8.1 protein.
          Length = 393

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 36  INLVHLDSXLCICFFLISCI--NFLNRFSIMLVFWWEDLSFCIGYPF 170
           +NL HL++ + I  FLI  I  +++  F  +++  WE   F  G+ F
Sbjct: 207 LNLDHLENYISIPIFLIVAILLSYIT-FGAVVLSMWEGWDFFSGFYF 252


>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 28  YYL*TWFTWIPXFAFVSSSYPVLI 99
           YY   W  W+    F+++S+P+L+
Sbjct: 271 YYF--WVVWVYTIPFIAASFPILL 292


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 129 FWWEDLSFCIGYPFFKIFWLVEKKEQ 206
           F W    FC+  P F+   L+ KK Q
Sbjct: 379 FTWATYVFCVFLPIFEPIQLISKKPQ 404


>U51993-3|AAB36853.2|  958|Caenorhabditis elegans Hypothetical
           protein F56F10.4 protein.
          Length = 958

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 122 HDREAIQKINTGYEEETNAKXGIQVNQVY 36
           ++ EAIQK++   E++ N   GI  N  Y
Sbjct: 219 YEDEAIQKLHWSSEKKKNVAFGISCNNKY 247


>U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related
           protein 15 protein.
          Length = 114

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 344 CD--KLANREKSKYNNLISKNLKR 279
           CD  KL  +EK  Y+ LI +NL R
Sbjct: 79  CDFRKLTRKEKQNYSGLIFRNLNR 102


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 150 FCIGYPFFKIFWLVEKKEQSNRKRCV 227
           F  GYP F   W  + KE +++ RCV
Sbjct: 144 FIHGYPEFWYSWRFQLKEFADKYRCV 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,336,627
Number of Sequences: 27780
Number of extensions: 182941
Number of successful extensions: 589
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)