Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C02
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    26   0.27 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    26   0.27 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.82 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.6  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 263 FCLEVSGAGSDDLRSVERDTVNSIQDDSRRVRGLREGGDCRNHTGSDEC 409
           +CL  + +  DD  +V+ D +  +  D  + R     G C   +GSD C
Sbjct: 75  YCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNC 123


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 263 FCLEVSGAGSDDLRSVERDTVNSIQDDSRRVRGLREGGDCRNHTGSDEC 409
           +CL  + +  DD  +V+ D +  +  D  + R     G C   +GSD C
Sbjct: 75  YCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNC 123


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 12/59 (20%), Positives = 33/59 (55%)
 Frame = +1

Query: 274  SERRGQRRPQECREGHR*QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQELPEAIRG 450
            S++  Q++PQ+ ++  + Q P +Q +    ++ +  Q+  ++++ Q   +Q+   A+ G
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSG 1555


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 99  TPKPLAAEHGDDRRENELI*ND 34
           T +P+  E   DR+ NE++ +D
Sbjct: 273 TVEPILTERPSDRQRNEILLSD 294


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 48  VHFLCGHHHARRPTVLGSLSIGSTPGVSSA 137
           V++  GHHH    T    +S  S     SA
Sbjct: 167 VNYTLGHHHQNGATPSSLVSSASASSAVSA 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,223
Number of Sequences: 438
Number of extensions: 2439
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)