Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C01
         (300 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKN6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_UPI00006CBA20 Cluster: hypothetical repeat containing p...    31   6.7  
UniRef50_A6M3J8 Cluster: Acyl-ACP thioesterase; n=1; Clostridium...    31   6.7  

>UniRef50_Q8IKN6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 973

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +2

Query: 209 FHINNISL--NILHFTFEFISYYFCYN 283
           F+INNI++  NILH      +YY+ YN
Sbjct: 762 FYINNITILDNILHIFLNIYNYYYIYN 788


>UniRef50_UPI00006CBA20 Cluster: hypothetical repeat containing
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical repeat containing protein - Tetrahymena
           thermophila SB210
          Length = 2555

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 221 NISLNILHFTFEFISYYFCYNCI 289
           NI ++IL  TF+F +YYF YN I
Sbjct: 931 NIEVDILQNTFQFNTYYFDYNYI 953


>UniRef50_A6M3J8 Cluster: Acyl-ACP thioesterase; n=1; Clostridium
           beijerinckii NCIMB 8052|Rep: Acyl-ACP thioesterase -
           Clostridium beijerinckii NCIMB 8052
          Length = 248

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -1

Query: 267 YEMNSNVKCKIFKLMLFM*NYGTS*TDLKMSXVISDVT*NNC 142
           YE+NSN++CK+  ++ F+ + GT  ++  +   I   T NNC
Sbjct: 14  YEVNSNLRCKLSSIIDFICDVGTQQSE-ALGGGIDYCTKNNC 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,799,235
Number of Sequences: 1657284
Number of extensions: 2637656
Number of successful extensions: 3832
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3827
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)