Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C01
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   0.62 
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    22   5.7  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    22   5.7  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 221 NISLNILHFTFEFISYYFCYNCI 289
           +I  +IL F   FI   FCY C+
Sbjct: 269 SIVTSILQFVLPFIIMAFCYICV 291


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 215 INNISLNILHFTFEFISYYFCYNCI 289
           I N+ +  L +TF  I   +CY  I
Sbjct: 211 IYNVLVMCLMYTFPLIVILYCYGSI 235


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 215 INNISLNILHFTFEFISYYFCYNCI 289
           I N+ +  L +TF  I   +CY  I
Sbjct: 211 IYNVLVMCLMYTFPLIVILYCYGSI 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,925
Number of Sequences: 2352
Number of extensions: 3240
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)