Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_C01
         (300 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006673-11|AAF39920.1|  311|Caenorhabditis elegans Hypothetical...    27   1.9  
Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical pr...    27   3.3  

>AC006673-11|AAF39920.1|  311|Caenorhabditis elegans Hypothetical
           protein K09D9.3 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 230 LNILHFTFEFISYYFCYNCI 289
           L  +H  FE IS+ FCYN +
Sbjct: 22  LQTVHPPFEIISFLFCYNVV 41


>Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical
           protein T06G6.1 protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 122 SNNISIIQLFYVTSDITXLIFKSVYEVP*FHINNISLNILHFTFEFISYYFCYN 283
           +N  S   +F +T D     +KS Y     +   ISL +L F    +S+Y  Y+
Sbjct: 119 TNYFSTYSVFSLTFDRLISHYKSKYYHMHQYFIAISLLVLQFLLAILSFYIAYH 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,141,729
Number of Sequences: 27780
Number of extensions: 68860
Number of successful extensions: 113
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)