Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B23
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87160-1|CAA60633.1|  649|Homo sapiens epithelial amiloride-sens...    29   6.4  
U53837-1|AAC50745.1|   91|Homo sapiens amiloride-sensitive epith...    29   6.4  
L36592-1|AAA75460.1|  649|Homo sapiens epithelial sodium channel...    29   6.4  
DQ402524-1|ABD72220.1|  649|Homo sapiens nasal epithelial sodium...    29   6.4  
BC069652-1|AAH69652.1|  649|Homo sapiens sodium channel, nonvolt...    29   6.4  
BC059391-1|AAH59391.1|  649|Homo sapiens sodium channel, nonvolt...    29   6.4  
AF356502-1|AAK50910.1|  649|Homo sapiens amiloride-sensitive epi...    29   6.4  

>X87160-1|CAA60633.1|  649|Homo sapiens epithelial
           amiloride-sensitive sodium channel, gamma-subunit
           protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


>U53837-1|AAC50745.1|   91|Homo sapiens amiloride-sensitive
           epithelial sodium channel gamma subunit protein.
          Length = 91

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 16  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 48


>L36592-1|AAA75460.1|  649|Homo sapiens epithelial sodium channel
           gamma subunit protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


>DQ402524-1|ABD72220.1|  649|Homo sapiens nasal epithelial sodium
           channel gamma subunit protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


>BC069652-1|AAH69652.1|  649|Homo sapiens sodium channel,
           nonvoltage-gated 1, gamma protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


>BC059391-1|AAH59391.1|  649|Homo sapiens sodium channel,
           nonvoltage-gated 1, gamma protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


>AF356502-1|AAK50910.1|  649|Homo sapiens amiloride-sensitive
           epithelial sodium channel gamma subunit protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 RFNCLGTNLFSCLILVSLNLKLTNICWIGFDKT 260
           R+ CL TN   C  +V    +L  + WIGF  T
Sbjct: 30  RWYCLNTNTHGCRRIVVSRGRLRRLLWIGFTLT 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,763,903
Number of Sequences: 237096
Number of extensions: 896681
Number of successful extensions: 1018
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)