Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B22
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AF458587-1|AAM49715.1|  302|Homo sapiens hepatoma-derived growth...    30   7.8  

>AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35331 fis, clone PROST2014659. ).
          Length = 577

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 258 ASVGLQQLEREAPPVEADACSAGDRQRLTHREPRVRAESEAGRA 127
           AS GLQ LE   PP  ++ C AG    L H+ P  R++   GR+
Sbjct: 536 ASCGLQLLEAP-PPGRSERCRAGMEHLLCHQSP-CRSQEHGGRS 577


>AF458587-1|AAM49715.1|  302|Homo sapiens hepatoma-derived growth
           factor HGDF5 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 255 SVGLQQLEREAPPVEADACSAGDRQRLTHREPRVRAESEAGRARGQVRRP 106
           S GL ++E + P VEA  C   D ++L   EP    E E G+      RP
Sbjct: 76  SEGLWEIEHD-PMVEASPCLCPDEEQLCAEEPGPGEEPEPGQELEPESRP 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,656,493
Number of Sequences: 237096
Number of extensions: 2185014
Number of successful extensions: 6244
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6244
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)