Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B21
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128711-1|BAC87585.1|  206|Homo sapiens protein ( Homo sapiens ...    34   0.56 
AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat volta...    31   3.0  
AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel l...    31   3.0  
AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel l...    31   3.0  
AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel l...    31   3.0  

>AK128711-1|BAC87585.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46878 fis, clone UTERU3014906. ).
          Length = 206

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 26/79 (32%), Positives = 37/79 (46%)
 Frame = +2

Query: 407 PAF*SSFHIYMSDFILAAAKSMPKIYYYNTFTYRRPTRVLYHPKGRLVLHPTXVSISNNT 586
           P+  SS  +++  FIL      P I+ Y   ++  P     HP   L LHPT + IS + 
Sbjct: 3   PSIHSSIDLFIHLFIL------PSIHLYIHLSFHLPIYYFIHPSIPLSLHPT-ILISTHL 55

Query: 587 SARTSQKAVCVQHTLHPRA 643
            A TS     +  T+HP A
Sbjct: 56  FAHTS-----IHPTIHPSA 69


>AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat
            voltage-gated ion channel protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 177  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 91
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 177  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 91
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 177  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 91
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 177  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 91
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,458,357
Number of Sequences: 237096
Number of extensions: 1729073
Number of successful extensions: 2749
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2749
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)