Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B20
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   338   4e-95
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   102   4e-24

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  338 bits (830), Expect = 4e-95
 Identities = 156/189 (82%), Positives = 170/189 (89%)
 Frame = -1

Query: 685 YPLTGMSKETQQQXIDDHFLFKEGDRFLQAANACRXWPTGRGIYHNENKTFLVWCNEEDH 506
           YPLTGMSKETQQ+ IDDHFLFKEGDRFLQAANACR WPTGRGIYHN++KTFLVWCNEEDH
Sbjct: 167 YPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDH 226

Query: 505 LRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXX 326
           LRIISMQMGGDL QVY+RLV AVNEIEK++ FSH+DRLGFLTFCPTNLGTTVRASVHI  
Sbjct: 227 LRIISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKL 286

Query: 325 XXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIA 146
                    LEE+A K++LQVRGTRGEHTEAEGG+YDISNKRR+GLTEY AVKEM+DGIA
Sbjct: 287 PKLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIA 346

Query: 145 ELIKIEKSL 119
           ELIK+EK L
Sbjct: 347 ELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  102 bits (244), Expect = 4e-24
 Identities = 44/50 (88%), Positives = 47/50 (94%)
 Frame = -1

Query: 685 YPLTGMSKETQQQXIDDHFLFKEGDRFLQAANACRXWPTGRGIYHNENKT 536
           YPLTGMSKETQQ+ IDDHFLFKEGDRFLQAANA R WPTGRGIYHN++KT
Sbjct: 151 YPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDDKT 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,963
Number of Sequences: 438
Number of extensions: 2528
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)