Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B10
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   150   6e-38
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.7  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    24   4.7  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   8.3  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   8.3  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   8.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  150 bits (363), Expect = 6e-38
 Identities = 79/189 (41%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
 Frame = -2

Query: 744 AKDYLGEFVQVNVGXTELSANRNIQQIVHVCEQDEKAEKFTEIMHKISGLGFGKTLVFTN 565
           A  +L  ++ V VG     A  +++Q +H+ E+ +K +K  EI++  +  G   TLVF  
Sbjct: 376 AGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKLEEILNGGNPKG---TLVFVE 431

Query: 564 TKKSVDYLERVLRGNGWPALGIHGDRTQLQRDMIINKFKTGKTNILVATDVAARGLDVDG 385
           TK++ DYL  ++    +P   IHGDR Q +R+M +  FK+G+ ++L+AT VAARGLD+  
Sbjct: 432 TKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKN 491

Query: 384 VTHVVNYDYPNTSEDYIHRIGRTGRQDNKGISHSILTEENAR-QAKDLIEVLKEAKQDIP 208
           V HVVNYD P + +DY+HRIGRTGR  NKG + S    E  R  A DL+++L +A Q +P
Sbjct: 492 VNHVVNYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQSVP 551

Query: 207 KELYDLARS 181
             L D   S
Sbjct: 552 DFLKDAGGS 560



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 797 ERXILMFSATWPKEVRTL 744
           +R  LMFSAT+P E++ L
Sbjct: 358 QRQTLMFSATFPAEIQEL 375


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 235 NFY*ILCLSCIFFSEYRMRYALVILTP 315
           NFY  L L+ +F     + YA+V L P
Sbjct: 600 NFYFALLLTMLFLCVLPVSYAIVFLEP 626


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 615 LSL*TSRLFRLVHIHGQFVVCCGWQTTQXNQH*PGQIHL 731
           + L TS   R V++ G++    GW  T+ +     ++HL
Sbjct: 239 ICLPTSEESRTVNLTGKYATVAGWGQTENSTSSTKKLHL 277


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +1

Query: 325 YSVNIIFRCIGI----VIVYYV 378
           Y+VN+I  C+GI    V+V+Y+
Sbjct: 248 YTVNLIIPCVGITFLTVLVFYL 269


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +1

Query: 325 YSVNIIFRCIGI----VIVYYV 378
           Y+VN+I  C+GI    V+V+Y+
Sbjct: 255 YTVNLIIPCVGISYLSVLVFYL 276


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +1

Query: 325 YSVNIIFRCIGI----VIVYYV 378
           Y+VN+I  C+GI    V+V+Y+
Sbjct: 242 YTVNLIIPCVGISFLSVLVFYL 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,038
Number of Sequences: 2352
Number of extensions: 15080
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)