Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_B10
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 142 3e-36
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 1.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 1.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 2.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.5
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 3.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 4.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 5.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 7.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 142 bits (345), Expect = 3e-36
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
Frame = -2
Query: 750 HSAKDYLGEFVQVNVGXTELSANRNIQQIVHVCEQDEKAEKFTEIMHKISGLG-FGKTLV 574
H A+ +L ++ + VG A +++Q + +++K + EI+ + + G G TLV
Sbjct: 398 HLARRFLNNYLFLAVGIVG-GACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGGTLV 456
Query: 573 FTNTKKSVDYLERVLRGNGWPALGIHGDRTQLQRDMIINKFKTGKTNILVATDVAARGLD 394
F KK D++ L N +P IHGDR Q QR+ + FK+G+ +ILVAT VAARGLD
Sbjct: 457 FVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLD 516
Query: 393 VDGVTHVVNYDYPNTSEDYIHRIGRTGRQDNKGISHSIL-TEENARQAKDLIEVLKEAKQ 217
+ V+HV+NYD P ++Y+HRIGRTGR N+G + S EE+A DL+ +LK+A Q
Sbjct: 517 IKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEEDAPLRGDLVRILKQANQ 576
Query: 216 DIP 208
+P
Sbjct: 577 SVP 579
Score = 26.6 bits (56), Expect = 0.27
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 797 ERXILMFSATWPKEVRTLQK 738
ER LMFSAT+P EV+ L +
Sbjct: 382 ERQTLMFSATFPDEVQHLAR 401
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = -2
Query: 621 EIMHKISGLGFGKTLVFTNTKKSVDYLERVLRGNGW 514
E+M K + G T T ++DY GW
Sbjct: 172 EVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTGW 207
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = -2
Query: 621 EIMHKISGLGFGKTLVFTNTKKSVDYLERVLRGNGW 514
E+M K + G T T ++DY GW
Sbjct: 172 EVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTGW 207
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
Frame = +1
Query: 325 YSVNIIFRCIGI----VIVYYV 378
Y+VN+I C+GI V+V+Y+
Sbjct: 239 YTVNLIIPCVGISFLSVLVFYL 260
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
Frame = +1
Query: 325 YSVNIIFRCIGI----VIVYYV 378
Y+VN+I C+GI V+V+Y+
Sbjct: 252 YTVNLIIPCVGITFLTVLVFYL 273
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 294 ISHSILTEENARQAKDLIEVLKEAKQDIPKELYD 193
+S + EE + K+L +V + K D PKEL D
Sbjct: 23 MSKKMTIEEAKKTIKNLRKVCSK-KNDTPKELLD 55
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
Frame = +1
Query: 325 YSVNIIFRCIGI----VIVYYV 378
Y+VN+I C+GI V+V+Y+
Sbjct: 243 YTVNLIIPCMGISFLTVLVFYL 264
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 304 ILTPCPTYSVNIIFRCIGIVIVY 372
++ P P +S N + C G+ VY
Sbjct: 102 LIAPYPNWSYNDVKYCDGLTSVY 124
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 288 EICPCYLDALSY 323
+ICP Y+++ SY
Sbjct: 128 QICPIYIESFSY 139
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 325 YSVNIIFRCIGI 360
Y+VNII C+GI
Sbjct: 247 YTVNIIIPCMGI 258
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 325 YSVNIIFRCIGI 360
Y+VNII C+GI
Sbjct: 247 YTVNIIIPCMGI 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,764
Number of Sequences: 438
Number of extensions: 4123
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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