Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B09
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0078 + 26223797-26223803,26224000-26224278,26224391-262246...    29   4.3  
02_03_0371 - 18267986-18268378                                         28   7.6  

>01_06_0078 +
           26223797-26223803,26224000-26224278,26224391-26224609,
           26226846-26226917,26228073-26228221,26228859-26229135,
           26230922-26231187
          Length = 422

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 434 LALFCVFGRTHELLQNARCAHGRCRKCCLRRLVGSISHLHVSGLV 300
           LA  C  G  + + + ARC HG  + C   +L GS    H S  V
Sbjct: 340 LAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAV 384


>02_03_0371 - 18267986-18268378
          Length = 130

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 362 GSDHGHTAHSVTIHVCVQTRKREQG 436
           G+  G TAH+   H  VQ R+RE G
Sbjct: 21  GTSFGGTAHARHRHAAVQARRREHG 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,510,352
Number of Sequences: 37544
Number of extensions: 335225
Number of successful extensions: 732
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)