Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B07
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   7.0  
AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical...    28   9.3  

>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 707 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 615
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 632 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 739
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical
           protein R12E2.13 protein.
          Length = 206

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 313 LLKFIRVHDSGRRDRHLVGFLPAITNHRLCVLPTADDYFIHWIYFCGMSCEGN 471
           +LKFI  +D  R   H V +        +  +  +DD   HW  F  ++ + N
Sbjct: 31  VLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCN 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,878,581
Number of Sequences: 27780
Number of extensions: 503980
Number of successful extensions: 1280
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)