Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B04
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q67M38 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_UPI0000498AAF Cluster: hypothetical protein 21.t00019; ...    33   9.2  
UniRef50_A7ASN5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q67M38 Cluster: Putative uncharacterized protein; n=1;
           Symbiobacterium thermophilum|Rep: Putative
           uncharacterized protein - Symbiobacterium thermophilum
          Length = 186

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 255 LPLCSCAGATWIALSLLHLFSSGWTSGNMK 344
           LP C C G+TW    ++H    GW S N +
Sbjct: 53  LPNCRCYGSTWTTNRVMHSARCGWASANRR 82


>UniRef50_UPI0000498AAF Cluster: hypothetical protein 21.t00019;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 21.t00019 - Entamoeba histolytica HM-1:IMSS
          Length = 722

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = +2

Query: 194 DCLLILASDILRGDVAIHTCLAFVFLCWSYLDSFVITTPIFKWLDIWKYEMLAISNKRIV 373
           +CL+ + S I +  + + +C+ ++F+C  +L S V        L IW Y +L I N  ++
Sbjct: 16  NCLMKVGSIICKIQLFVFSCVLYIFICLMFLISTVYQ------LQIWFYAVLMIYNSILL 69

Query: 374 CKYIGLY 394
             ++  Y
Sbjct: 70  FSWLYNY 76


>UniRef50_A7ASN5 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 858

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 242 IHTCLAFVFLCWSYLDSFVITTPIFKWLDIWKYEMLAISNKRIVCKYI 385
           +HTC A + +C     SFV+T   + W    K+E    S+ RI  KY+
Sbjct: 497 LHTCSALLMMCAYGFSSFVLTAIFYIWNQNVKFE---FSHIRIFVKYL 541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,909,647
Number of Sequences: 1657284
Number of extensions: 11622666
Number of successful extensions: 27003
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26992
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)