Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B04
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    29   3.3  
U52002-5|AAB37729.2|  534|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U23174-4|AAC46710.2|  294|Caenorhabditis elegans Serpentine rece...    28   5.8  
U23174-3|AAX22284.1|  381|Caenorhabditis elegans Serpentine rece...    28   5.8  
U41533-13|AAA83174.3|  955|Caenorhabditis elegans Hypothetical p...    28   7.6  
AF039041-6|AAB94190.1|  389|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 234 SPLNISEASISKQSEPAKKKTVV 166
           SPL++ E +IS+Q  P+KK T +
Sbjct: 9   SPLSLGETNISQQKHPSKKSTAL 31


>U52002-5|AAB37729.2|  534|Caenorhabditis elegans Hypothetical
           protein F08B4.5 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 179 FFAGSDCLLILASDILRGDVAIHTCLAFVFLCWSYLDSFVITTPIFKWLDIWK 337
           +F G D +    SD LR  +A     + VFL   +LD   +   +FK L  +K
Sbjct: 249 WFGGDDKIAFRCSDRLRSALAKQEDTSLVFLSDVFLDDKKVMKAVFKLLQGYK 301


>U23174-4|AAC46710.2|  294|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 14, isoform b
           protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 381 YLQTIRLLEIANISYFQMSSHLKIGVVMTKLSK*LQHRNTKARQVCIATSPL 226
           ++QTIRL+ I   ++  +SS L I V++   S+ L HRN +     +A + L
Sbjct: 40  FMQTIRLVHIFFCTFGAISSSLFIYVLLNSSSRNL-HRNLRISLASLAFAAL 90


>U23174-3|AAX22284.1|  381|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 14, isoform a
           protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 381 YLQTIRLLEIANISYFQMSSHLKIGVVMTKLSK*LQHRNTKARQVCIATSPL 226
           ++QTIRL+ I   ++  +SS L I V++   S+ L HRN +     +A + L
Sbjct: 40  FMQTIRLVHIFFCTFGAISSSLFIYVLLNSSSRNL-HRNLRISLASLAFAAL 90


>U41533-13|AAA83174.3|  955|Caenorhabditis elegans Hypothetical
           protein R05F9.12 protein.
          Length = 955

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 497 NGSEGQCPARGYIIWADDD 441
           NG++G C ARG  IW +DD
Sbjct: 29  NGNQGACEARG-CIWKEDD 46


>AF039041-6|AAB94190.1|  389|Caenorhabditis elegans Hypothetical
           protein W03F8.3 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 261 KARQVCIATSPLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGATVD 103
           + ++V +  S ++ S ASIS   EP +   VVP D    +   A    G  V+
Sbjct: 210 RVQRVPVNDSRMHTSTASISVLPEPEEVSVVVPSDSVKIEAMRASGPGGQNVN 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,614,797
Number of Sequences: 27780
Number of extensions: 293364
Number of successful extensions: 687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)