Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B01
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.86 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    25   0.86 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.86 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.0  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   2.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   4.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   4.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   4.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   6.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   6.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   6.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   6.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.0  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ +R++
Sbjct: 200 KEFHFNKYLTRRRR 213


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ +R++
Sbjct: 200 KEFHFNKYLTRRRR 213


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ +R++
Sbjct: 200 KEFHFNKYLTRRRR 213


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 259 KEFHFNRYLTRRRR 272


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 193 KEFHFNRYLTRRRR 206


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 25  KEFHFNRYLTRRRR 38


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 261 KEFHFNRYLTRRRR 274


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 237 KEFHFNRYLTRRRR 250


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN ++ +R++
Sbjct: 23  KEFHFNHYLTRRRR 36


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FH+N+++ +R++
Sbjct: 250 KEFHYNRYLTRRRR 263


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FH+N+++ +R++
Sbjct: 250 KEFHYNRYLTRRRR 263


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ + ++
Sbjct: 270 KEFHFNKYLTRARR 283


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FH+N+++ +R++
Sbjct: 250 KEFHYNRYLTRRRR 263


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ + ++
Sbjct: 59  KEFHFNKYLTRARR 72


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ + ++
Sbjct: 59  KEFHFNKYLTRARR 72


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN ++ +R++
Sbjct: 174 KEFHFNHYLTRRRR 187


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN ++ +R++
Sbjct: 233 KEFHFNHYLTRRRR 246


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ + ++
Sbjct: 21  KEFHFNKYLCRPRR 34


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 106 ISQSDPQTQFNNYSNINRSI 165
           I ++ P    N Y+N+NR +
Sbjct: 371 IEKNPPIMNLNGYANVNRKL 390


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 106 ISQSDPQTQFNNYSNINRSI 165
           I ++ P    N Y+N+NR +
Sbjct: 371 IEKNPPIMNLNGYANVNRKL 390


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFNK++ + ++
Sbjct: 152 KEFHFNKYLCRPRR 165


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 678 LHLTXAGPSLSTPAPSHTXIIE 743
           LH+T A     T  PSH  +++
Sbjct: 166 LHITLASGRTLTVTPSHLLVLD 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,174
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 30
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)