Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B01
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039053-6|AAC25874.2|  287|Caenorhabditis elegans Serpentine re...    31   0.66 
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    29   4.7  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     29   4.7  

>AF039053-6|AAC25874.2|  287|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 21 protein.
          Length = 287

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = -2

Query: 605 IVFFSFIYKL-IEVKFLWRV*WQNYRK-ENLFRKQLIKNCIIKKYNLTLSIISFY 447
           I+ F+F++ + + +K LW+V  +  +   N  R  LI   II  ++++ SIIS+Y
Sbjct: 175 IIAFTFLFAIMLSLKLLWKVIKEKNKDFNNANRLALIDAAIIFLFDISSSIISYY 229


>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 49  TLIHFFRADPEDATSLCERISQSDPQTQFNNYSNINRS 162
           TLI F +  P   T+ CER S SD   ++N Y N+N S
Sbjct: 45  TLIGFLKDFPSTQTNYCERFS-SD-AARWNLYPNLNYS 80


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 49  TLIHFFRADPEDATSLCERISQSDPQTQFNNYSNINRS 162
           TLI F +  P   T+ CER S SD   ++N Y N+N S
Sbjct: 45  TLIGFLKDFPSTQTNYCERFS-SD-AARWNLYPNLNYS 80


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 49  TLIHFFRADPEDATSLCERISQSDPQTQFNNYSNINRS 162
           TLI F +  P   T+ CER S SD   ++N Y N+N S
Sbjct: 45  TLIGFLKDFPSTQTNYCERFS-SD-AARWNLYPNLNYS 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,043,714
Number of Sequences: 27780
Number of extensions: 297503
Number of successful extensions: 564
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)