Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_B01
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.58 
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    23   2.3  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   5.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   5.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   9.4  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   9.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.4  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 8/28 (28%), Positives = 20/28 (71%)
 Frame = -2

Query: 626 ECMLXIFIVFFSFIYKLIEVKFLWRV*W 543
           +C++ + ++ FS IY+++E ++L+   W
Sbjct: 91  DCLVGLVVMPFSAIYEVLENRWLFTTDW 118


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FHFN+++ +R++
Sbjct: 25  KEFHFNRYLTRRRR 38


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FH+N+++ +R++
Sbjct: 25  KEFHYNRYLTRRRR 38


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 641 YVTSKECMLXIFIVFFSFIYKLIEVKFLWRV 549
           Y+   +C+  + + F+SFI   I + F+ ++
Sbjct: 381 YLLGIQCLTVVCLAFWSFIVSTILLWFINKI 411


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = +3

Query: 558 KKFHFNKFIYKRKK 599
           K+FH+N+++ +R++
Sbjct: 287 KEFHYNRYLTRRRR 300


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 509 QLIKNCIIKKYN 474
           QL   C+IKK+N
Sbjct: 60  QLFSECLIKKFN 71


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 509 QLIKNCIIKKYN 474
           QL   C+IKK+N
Sbjct: 60  QLFSECLIKKFN 71


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 490 MQFFISCFLNKFSF 531
           +Q +I C + KFSF
Sbjct: 59  VQLYIECAMKKFSF 72


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 462 GQCEIVFFYNAIFYKLFPK 518
           GQ    ++ NAIFY+++P+
Sbjct: 18  GQNNKGWWKNAIFYQVYPR 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,627
Number of Sequences: 438
Number of extensions: 3992
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)