Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_A23
(531 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 186 6e-47
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 186 6e-47
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 186 6e-47
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 186 6e-47
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 85 1e-16
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 6e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 426 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 265
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 264 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 118 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 147
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 85.0 bits (201), Expect = 1e-16
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -1
Query: 219 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 97
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 41
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 92 RDVEIGDIVTIGECRPLSKTVRFNVLKVSK 3
RDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 43 RDVQIGDIVTVGECRPLSKTVRFNVLKVTK 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,728,833
Number of Sequences: 237096
Number of extensions: 1600758
Number of successful extensions: 3422
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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