Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_A19
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-8|AAB53829.1|  160|Caenorhabditis elegans Hypothetical pr...    52   5e-07
Z74043-4|CAA98541.1|  733|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AF040655-11|AAB95040.1|  251|Caenorhabditis elegans Hypothetical...    29   3.1  
AL110485-16|CAB60364.1|  295|Caenorhabditis elegans Hypothetical...    29   4.1  
Z73103-5|CAA97422.1|  380|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC006762-10|AAF60556.1|  301|Caenorhabditis elegans Hypothetical...    28   7.2  
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL021489-2|CAA16370.1|  333|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U00048-8|AAB53829.1|  160|Caenorhabditis elegans Hypothetical
           protein C05D11.10 protein.
          Length = 160

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = -2

Query: 478 AKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALP--EKLTKLITHEIKE 305
           A++R +  E +  L  YF +   ++  D   +   GD VLI+ +    +    ++H +  
Sbjct: 34  AQVRCQMNEFNIYLKKYFARSFDFWALDKTSLGNIGDTVLIKQIDGSSRPKANVSHAVDR 93

Query: 304 VVYPFGDITDPVTGKKVSKEQYKEDIE 224
           VV+ FG+I DPVTG+K+  + + ++I+
Sbjct: 94  VVFKFGNIVDPVTGRKIFNDTFADEID 120


>Z74043-4|CAA98541.1|  733|Caenorhabditis elegans Hypothetical
           protein T19B10.8 protein.
          Length = 733

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/58 (25%), Positives = 33/58 (56%)
 Frame = -2

Query: 313 IKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKK 140
           +  V++ + +  D +TG++V ++ YKED++R  +   R K   + +  P +  + G+K
Sbjct: 312 VSRVLWSYAENLDTLTGRQVVQKFYKEDVDRNIK---RAKLVRHVNDVPSKEIKIGEK 366


>AF040655-11|AAB95040.1|  251|Caenorhabditis elegans Hypothetical
           protein T24E12.2 protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 277 DPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKKDF 134
           DP  GKKV   Q K  +  Q+ LYG  +ST +Y+   P+   + K+D+
Sbjct: 155 DP-NGKKVVP-QIKMFVRNQSSLYGNQRSTKSYNLPWPKIRSEDKEDW 200


>AL110485-16|CAB60364.1|  295|Caenorhabditis elegans Hypothetical
           protein Y46G5A.22a protein.
          Length = 295

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 441 FSSNSNLFT----LIFAAFCLTVGTHCPSKRNFLAASATFLD 554
           F S +N+FT    +IFA++C     +C S+R     + +F+D
Sbjct: 238 FMSIANMFTRMDAIIFASYCEFAARYCRSRRLMCDVTCSFVD 279


>Z73103-5|CAA97422.1|  380|Caenorhabditis elegans Hypothetical
           protein C08F8.6 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = -2

Query: 394 SEKICKTGDIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQT 215
           +EK+ K  ++ L +    K TK +T   KE+V    +       K+  KE+Y++D  ++ 
Sbjct: 321 TEKVIKKKEVELAEGKSHKETKEVTKVSKEIVEEKKE-EKKEEKKEEKKEKYEDD--KKE 377

Query: 214 ELY 206
           ELY
Sbjct: 378 ELY 380


>AC006762-10|AAF60556.1|  301|Caenorhabditis elegans Hypothetical
           protein Y42G9A.1 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = -3

Query: 618 LEIFSKYRNTAKRINKKTT------KKCQEMSLMQPENFSYLDNVYRLL 490
           LE+F K++N  + IN+  T      + C  +S+  P N   + + + LL
Sbjct: 188 LEMFEKFKNDVQEINRLHTLTQILNQFCNYISMYAPPNLKMISSAFNLL 236


>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
           protein W08D2.7 protein.
          Length = 1026

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -2

Query: 283 ITDPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKKDFTSKPTYTK 110
           + DP+   ++   + KE I R+  L GRL++   +S       +D KK F  K    K
Sbjct: 761 LLDPIQDMEIKTVEMKELIAREKSLEGRLET---HSMTKRDNMKDLKKQFEQKQDAVK 815


>AL021489-2|CAA16370.1|  333|Caenorhabditis elegans Hypothetical
           protein Y44A6C.2 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 609 IFLNKI*FRDSDLNRFFYESSAGRIH 686
           ++L+K  F DSD+N+F  E  +G  H
Sbjct: 183 VYLDKSDFYDSDMNQFLRELKSGSSH 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,100,241
Number of Sequences: 27780
Number of extensions: 315439
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)