Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_A17
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase sub... 97 7e-20
U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subu... 97 7e-20
M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein. 97 7e-20
M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subu... 97 7e-20
BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase su... 97 7e-20
AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase su... 97 7e-20
BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase su... 90 8e-18
AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase su... 90 8e-18
AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase su... 90 8e-18
BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein. 42 0.002
CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein. 31 5.3
BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein. 31 5.3
BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein. 31 5.3
BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein. 31 5.3
AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens ... 31 5.3
>X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase
subunit IV protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subunit
IV protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subunit
IV precursor protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase
subunit IV protein.
Length = 144
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 11 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 127
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 123 MKVNPIQGLASKWDYEKNEWK 143
>AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 96.7 bits (230), Expect = 7e-20
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 298
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 297 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+ P
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNP 152
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNPI GLASKWDYE N WK
Sbjct: 148 MKVNPIQGLASKWDYEKNEWK 168
>BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 89.8 bits (213), Expect = 8e-18
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = -3
Query: 450 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 274
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 273 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+G AA + +V+V+ P P +L++ER+ QLQRMLD+ P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNP 154
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNP+ GLAS+WDYE +WK
Sbjct: 150 MKVNPVQGLASRWDYEKKQWK 170
>AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 89.8 bits (213), Expect = 8e-18
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = -3
Query: 450 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 274
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 273 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+G AA + +V+V+ P P +L++ER+ QLQRMLD+ P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNP 154
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNP+ GLAS+WDYE +WK
Sbjct: 150 MKVNPVQGLASRWDYEKKQWK 170
>AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 precursor protein.
Length = 171
Score = 89.8 bits (213), Expect = 8e-18
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = -3
Query: 450 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 274
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 273 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLXGEP 127
+G AA + +V+V+ P P +L++ER+ QLQRMLD+ P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNP 154
Score = 37.9 bits (84), Expect = 0.035
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 140 LXVNPIDGLASKWDYENNRWK 78
+ VNP+ GLAS WDYE +WK
Sbjct: 150 MKVNPVQGLASHWDYEKKQWK 170
>BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein.
Length = 83
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 474 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEK 349
P Y+DR D PLP + + + KAL+EKEK W L+++EK
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEK 78
>CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein.
Length = 305
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGW 437
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 210 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGY 258
>BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGW 437
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGY 664
>BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGW 437
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGY 664
>BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGW 437
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGY 664
>AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ20725 fis, clone HEP13903. ).
Length = 305
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGW 437
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 210 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGY 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,986,349
Number of Sequences: 237096
Number of extensions: 2836083
Number of successful extensions: 6742
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6730
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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