BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_A12
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2... 69 2e-11
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein. 69 2e-11
>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
alpha-2-macroglobulin domain containing 8 protein.
Length = 1885
Score = 68.9 bits (161), Expect = 2e-11
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Frame = -1
Query: 560 TPDRLEYKF--GPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIRY 387
TP++ E+++ P+ + R ++ V+L++ P + M EI++GG +NT+S I
Sbjct: 955 TPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWIST 1014
Query: 386 CRQKPDKVTIPTPGIMNPNEFKKFLIEWRCGRLLV---RDRTSGTVLMEWVDPAPFPVTH 216
+ + T I++ +EF+ F I WR G + V + ++ +V++ W P P V
Sbjct: 1015 SKMGEPVASAHTAKILSWDEFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQF 1074
Query: 215 FGVRTGYGARGQWRI 171
G TG+G+ G++RI
Sbjct: 1075 IGFSTGWGSMGEFRI 1089
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 740 EYRGFWVRWDXGIISAGREGEAIP---FISWSDPEPFPVXYVGVCTGWGATGSWKIEDGA 570
E+R FW+ W G+I G E ++W+ P P V ++G TGWG+ G ++I
Sbjct: 1034 EFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFRIWRKM 1093
Query: 569 EFD 561
E D
Sbjct: 1094 EVD 1096
>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
Length = 1884
Score = 68.9 bits (161), Expect = 2e-11
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Frame = -1
Query: 560 TPDRLEYKF--GPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIRY 387
TP++ E+++ P+ + R ++ V+L++ P + M EI++GG +NT+S I
Sbjct: 954 TPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWIST 1013
Query: 386 CRQKPDKVTIPTPGIMNPNEFKKFLIEWRCGRLLV---RDRTSGTVLMEWVDPAPFPVTH 216
+ + T I++ +EF+ F I WR G + V + ++ +V++ W P P V
Sbjct: 1014 SKMGEPVASAHTAKILSWDEFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQF 1073
Query: 215 FGVRTGYGARGQWRI 171
G TG+G+ G++RI
Sbjct: 1074 IGFSTGWGSMGEFRI 1088
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 740 EYRGFWVRWDXGIISAGREGEAIP---FISWSDPEPFPVXYVGVCTGWGATGSWKIEDGA 570
E+R FW+ W G+I G E ++W+ P P V ++G TGWG+ G ++I
Sbjct: 1033 EFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFRIWRKM 1092
Query: 569 EFD 561
E D
Sbjct: 1093 EVD 1095
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,744,416
Number of Sequences: 237096
Number of extensions: 3008100
Number of successful extensions: 6595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6591
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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