Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_A09
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0271 - 21804629-21805836,21805997-21806015                       29   4.9  
06_01_0333 + 2404459-2404857,2404917-2405009,2405428-2405522,240...    29   6.5  

>11_06_0271 - 21804629-21805836,21805997-21806015
          Length = 408

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -2

Query: 856 SQHTCRVVELASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLPLATFALIATYF 692
           S   C V  ++S T       ++S  VC     +G+  I+F       A+++TYF
Sbjct: 183 SDSMCIVAAISSRTLALWHPGMRSWCVCRSFGIDGSADIAFYQGRIYMAMVSTYF 237


>06_01_0333 +
           2404459-2404857,2404917-2405009,2405428-2405522,
           2406146-2406219,2406307-2406395,2406745-2406858
          Length = 287

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 610 LGVPNSVLSAPNLVLTEKNSKEFIVNLSSFSYICPHL 500
           L V N +L+    +       EF V +S+F+YI PHL
Sbjct: 220 LSVQNRLLNIDENIYIPITKGEFAVIVSTFNYIIPHL 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,053,760
Number of Sequences: 37544
Number of extensions: 339270
Number of successful extensions: 807
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)