Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_A09
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical
           protein F56E10.3 protein.
          Length = 475

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 376 FMKHFLFRKLKWNFRYCFKQYCEFYQVFFKISSLMNN 486
           F+K  +F  L WN  Y FK +  F+ +  ++ + + N
Sbjct: 7   FLKLAIFETLFWNLSYIFKHFQNFFGILTQLLATVKN 43


>Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical
           protein T03F6.9 protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 775 CNKDNCNGAGSISFSLPLATFA 710
           C KD CNGAG +S    +A F+
Sbjct: 107 CGKDKCNGAGKVSTIFVVAMFS 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,145,772
Number of Sequences: 27780
Number of extensions: 361338
Number of successful extensions: 865
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)