Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_A08
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 117 1e-26
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 41 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 41 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 41 0.001
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 39 0.004
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 39 0.006
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.006
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 39 0.006
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.006
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 39 0.006
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.006
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.006
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 38 0.008
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.023
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.023
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.031
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.040
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.040
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.040
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.040
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.040
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.053
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 36 0.053
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 35 0.071
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 35 0.071
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.093
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.093
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.093
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.093
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.12
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 34 0.12
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.16
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.16
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.16
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.22
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 32 0.50
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 32 0.66
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.5
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.5
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 31 1.5
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 29 6.1
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40954-3|AAL00885.1| 171|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40954-2|ABB88226.1| 152|Caenorhabditis elegans Hypothetical pr... 29 6.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 28 8.1
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 8.1
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 117 bits (281), Expect = 1e-26
Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Frame = -2
Query: 819 SWXDEVEIDQGVLPPPXEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 640
SW + VE D P + +G + T + + D + K+V +K+ + V K +A RK
Sbjct: 9 SWAEAVEQDNA---PHIQEGADGTRTETAFT-EVDGVRWKVVTQFKVINKRVPKVVADRK 64
Query: 639 TWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCR 460
W KFG + GP ATT VAE+V MQF ++ Q D E +S CR
Sbjct: 65 KWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQILDVQEDKQTAKTTSRE--HCR 122
Query: 459 TCQG-DHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXASNKYIPPSSAGRIPGRDQPPVRR 283
C+G DH + +CP+K + + G P Q R
Sbjct: 123 HCKGNDHWSTHCPYK----------VMYQLDEEADADKDTEKDRMAMGMRPDGRQIDRNR 172
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
D R++NL E ++ DL G V ++++A++K TG KGFA+V F+ R DAA+
Sbjct: 173 SDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAAR 232
Query: 102 AIQXLNGHGYDHLILNVEWSKP 37
AI LN H++L VEW++P
Sbjct: 233 AIAELNDIRMYHMVLKVEWTRP 254
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = -2
Query: 261 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
+ NL E D+ L K +G V ++ + +K TG CKGFA V F F A A L+G
Sbjct: 283 LRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDG 342
Query: 81 HGYDHLILNV 52
+ + ++++
Sbjct: 343 YVFKGRMMHI 352
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 261 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
+ NLS++ E D+ D+ FG ++K L ++ +G+ +GF +++F DA A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 81 HGYDHLILNVEWS 43
D + V++S
Sbjct: 140 TDLDGHKIRVDFS 152
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = -2
Query: 270 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQX 91
++ + N+ E +I + G V+ + + ++ TG +GFA+V F A A +A++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 90 LNGHGYDHLILNVEWS 43
LNG ++ L V ++
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -2
Query: 330 SSAGRIPGRDQPPVRREDVTAIRISNLSNFAV---EADIDDLVKGFGPVHKLYLAKEKST 160
SS GR + Q V+++ + I + + E ++ + FG V ++ +A+ + T
Sbjct: 10 SSGGRKQPQKQDKVQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRT 69
Query: 159 GHCKGFAYVHFKFRADAAKAIQXLNGH 79
G+ KG+AYV F +A A A + +NG+
Sbjct: 70 GNHKGWAYVGFDNKAVAEIAAESMNGY 96
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = -2
Query: 276 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 97
+T+++I NLS D+ + +G + +++ ++K + KGF +V F R DA A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 96 QXLNGHGYDHLILNVEWSK 40
+G D L V +K
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = -2
Query: 276 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 97
+T+++I NLS D+ + +G + +++ ++K + KGF +V F R DA A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 96 QXLNGHGYDHLILNVEWSK 40
+G D L V +K
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -2
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
+D I I LS E D+ + +G V + L ++K TG KGFA++ +K +
Sbjct: 35 KDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTIL 94
Query: 102 AIQXLNGHGYDHLILNVE 49
A+ NG ++ V+
Sbjct: 95 AVDNFNGISLHKRMIRVD 112
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = -2
Query: 306 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 127
RDQ R T + + NLS + E + +L G V ++ + ++ GF +V +
Sbjct: 27 RDQETALRTSCT-LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
Query: 126 KFRADAAKAIQXLNGHGYDHLILNVEW 46
R DA A+Q ++ D ++ +W
Sbjct: 86 YTREDAELALQNISNTRMDDRVIRADW 112
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWS 43
+ R +A +AI+ +NG + W+
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 98
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 126 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 178
Query: 99 IQXLNGHGYDHLILNVEWSK 40
I +N ++ W K
Sbjct: 179 IVQMNNQDVGGQLVRCSWGK 198
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWS 43
+ R +A +AI+ +NG + W+
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 108
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 136 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 188
Query: 99 IQXLNGHGYDHLILNVEWSK 40
I +N ++ W K
Sbjct: 189 IVQMNNQDVGGQLVRCSWGK 208
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWS 43
+ R +A +AI+ +NG + W+
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 211
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 239 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 291
Query: 99 IQXLNGHGYDHLILNVEWSK 40
I +N ++ W K
Sbjct: 292 IVQMNNQDVGGQLVRCSWGK 311
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG+ Q + + + +LS+ + + + FG V + ++ +T KG+ +V
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWS 43
+ R +A +AI+ +NG + W+
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRRTIRTNWA 179
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T++ + N+++ E +I FG + ++ + K +G+A+V F + AAKA
Sbjct: 207 DNTSVYVGNIASLT-EDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKA 259
Query: 99 IQXLNGHGYDHLILNVEWSK 40
I +N ++ W K
Sbjct: 260 IVQMNNQDVGGQLVRCSWGK 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 170
Query: 117 ADAAKAIQXLNG 82
A AIQ +NG
Sbjct: 171 EAAQNAIQKVNG 182
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWSK 40
+F+ ADA +A+ +N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 49 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 107
Query: 117 ADAAKAIQXLNG 82
A AIQ +NG
Sbjct: 108 EAAQNAIQKVNG 119
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P +RR I I NL I D FG + +A ++ G KG+ +VHF+
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETE 170
Query: 117 ADAAKAIQXLNG 82
A AIQ +NG
Sbjct: 171 EAAQNAIQKVNG 182
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWSK 40
+F+ ADA +A+ +N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P V R I + L E+ + +L+ GPV + + K++ T + +GF +V F
Sbjct: 5 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 64
Query: 117 ADAAKAIQXLN 85
DA AI+ LN
Sbjct: 65 EDADYAIKILN 75
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 279 DVTA-IRISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAA 106
DV A I + NL E + D FG + ++ + ++ +G KGFA+++F +
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 156
Query: 105 KAIQXLNG 82
A++ +NG
Sbjct: 157 TALEAMNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P V R I + L E+ + +L+ GPV + + K++ T + +GF +V F
Sbjct: 15 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 74
Query: 117 ADAAKAIQXLN 85
DA AI+ LN
Sbjct: 75 EDADYAIKILN 85
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 279 DVTA-IRISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAA 106
DV A I + NL E + D FG + ++ + ++ +G KGFA+++F +
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 166
Query: 105 KAIQXLNG 82
A++ +NG
Sbjct: 167 TALEAMNG 174
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = -2
Query: 276 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 97
V + I N+ E +++L K + + ++ K+ +A++HF R D KA+
Sbjct: 376 VKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAM 427
Query: 96 QXLNGHGYDHLILNVEWSKPPQNN*K 19
+ NG + ++ +KPPQ K
Sbjct: 428 EEWNGKELEGTVVEASLAKPPQEKKK 453
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
I + ++ E + L + G + L L + +G +G+A+V + + DAA A +
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 87 NGH 79
+GH
Sbjct: 262 DGH 264
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 261 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 94
+ NLS E I + + FG + + K K +GH KG A+VHF +A+ I+
Sbjct: 267 LRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIE 322
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 261 ISNLSNFAVEADIDDLVKGFGPVHKLYLA-KEKSTGHCKGFAYVHFKFRADAAKAIQXLN 85
I NL + D+ +L G ++ L K C GF ++ F +ADA K + N
Sbjct: 99 IRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREFFN 158
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/75 (20%), Positives = 37/75 (49%)
Frame = -2
Query: 276 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 97
+ ++ + N E ++ + G ++ + + ++ TG +GFA++ F A +A+
Sbjct: 4 IFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Query: 96 QXLNGHGYDHLILNV 52
+ +NG ++ L V
Sbjct: 64 EQMNGAEFNGRPLRV 78
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = -2
Query: 270 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQX 91
++ + N E D+ + G V + + ++ TG +GFA+V F A A +A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 90 LNGHGYDHLILNVEWSKPPQN 28
NG ++ L V ++ N
Sbjct: 65 FNGVDFNGRALRVNLAQNRNN 85
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
PP + ++ I +L EA + + GPV + + ++ ++ G+AYV+F+
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 117 ADAAKAIQXLNGHGYDHLILNVEWSK 40
ADA +A+ +N + + WS+
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P RR I I NL + D FG + +A + G+ KG+ +VHF+
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 117 ADAAKAIQXLNG 82
A AI+ +NG
Sbjct: 196 HSAQTAIEKVNG 207
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
PP + ++ I +L EA + + GPV + + ++ ++ G+AYV+F+
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 117 ADAAKAIQXLNGHGYDHLILNVEWSK 40
ADA +A+ +N + + WS+
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -2
Query: 297 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 118
P RR I I NL + D FG + +A + G+ KG+ +VHF+
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 117 ADAAKAIQXLNG 82
A AI+ +NG
Sbjct: 196 HSAQTAIEKVNG 207
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T++ + N++N E +I FGP++ E T +G+A+V F+ + AA+A
Sbjct: 254 DNTSVYVGNIANLG-EDEIRRAFDRFGPIN------EVRTFKIQGYAFVKFETKESAARA 306
Query: 99 IQXLNGHGYDHLILNVEWSK 40
I +N I+ W K
Sbjct: 307 IVQMNNADIGGQIVRCSWGK 326
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNGHGYDHLILNVEWS--KPPQ 31
FG V + + ++ +T KG+ +V + R DA +AI +NG + W+ KP +
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDE 214
Query: 30 N 28
+
Sbjct: 215 D 215
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 127
D ++ + N+ A +I+ G G V ++ + ++ +GH KGFAYV F
Sbjct: 76 DAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 102 AIQXLNG 82
AI LNG
Sbjct: 347 AIAGLNG 353
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = -2
Query: 312 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 133
PG++Q + ++ + +L E+ + + GPV + + ++ +T G+AYV
Sbjct: 20 PGQNQTG-SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYV 78
Query: 132 HFKFRADAAKAIQXLNGHGYDHLILNVEWSK 40
+F+ ADA +A+ +N + + WS+
Sbjct: 79 NFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 102 AIQXLNG 82
AI LNG
Sbjct: 347 AIAGLNG 353
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 321
Query: 102 AIQXLNG 82
AI LNG
Sbjct: 322 AIAGLNG 328
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 282 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 103
+ I I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 324
Query: 102 AIQXLNG 82
AI LNG
Sbjct: 325 AIAGLNG 331
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 35.5 bits (78), Expect = 0.053
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = -2
Query: 270 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQX 91
++ + N+S E I + G V + + ++ TG KG+ ++ F A AI+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 90 LNGHGYDHLILNVE 49
LNG+ IL V+
Sbjct: 79 LNGYELSGRILRVD 92
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 174 KEKSTGHCKGFAYVHFKFRADAAKAIQXLNGHGYDHLILNVE 49
K K H +AYV F+ DA KAI ++G+ Y IL+ +
Sbjct: 55 KSKKVRHMSDYAYVTFETPEDAQKAINLVDGYDYKKFILSAQ 96
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -2
Query: 285 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 106
+ D T++ + N+S +AD+ DL +G + ++ + K + +A+V ++ + A
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECAT 286
Query: 105 KAIQXLNG 82
KAI +NG
Sbjct: 287 KAIMEMNG 294
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNGHGYDHLILNVEWS 43
FG V + + ++ T KG+ +V F + +A AI +NG + W+
Sbjct: 158 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 211
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNGHGYDHLILNVEWSKPPQ 31
FG V + + + +G +GF +V F DAA AI +N + V +++PP+
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPK 91
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 34.7 bits (76), Expect = 0.093
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 186 LYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNGHGYDHLILNV 52
++L ++ +G KGFAYV F+ AI LNG + + +L V
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 87 NGH--GYDHLILNVEWSKP 37
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 87 NGH--GYDHLILNVEWSKP 37
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
I I L++ E DI+ +G+G + + L GF +V F + DA A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDL 56
Query: 87 NGH--GYDHLILNVEWSKP 37
NG G + +IL ++SKP
Sbjct: 57 NGKELGGERVIL--DYSKP 73
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -2
Query: 252 LSNFAVEADIDDLVKGF----GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 97
+ N E D L+ F GPV + + ++K TG KGFA+V+FK + + A+
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = -2
Query: 297 PPVRRE----DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVH 130
PP E D ++ I N+ + +I++ KG G + K + K+K T K FAY+
Sbjct: 43 PPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIE 102
Query: 129 FKFRADAAKAIQXLNG 82
F + A+ +NG
Sbjct: 103 FDDSSSIENAL-VMNG 117
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
FGP+ + ++ + +TGH K FA+V ++ A A + +NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 87 N 85
N
Sbjct: 269 N 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
FGP+ + ++ + +TGH K FA+V ++ A A + +NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 87 N 85
N
Sbjct: 269 N 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 204 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
FGP+ + ++ + +TGH K FA+V ++ A A + +NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
+ +S++ E D+ + + FG + K LA+ + +GF Y+ F ++AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 87 N 85
N
Sbjct: 269 N 269
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 792 QGVLPPPXEVVE-NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDS 616
+GV P E+ + NGL V E Y+ND +K +T + +V S K K + D
Sbjct: 328 KGVHPKAPEIFQSNGLDSVIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKRQEESDDE 387
Query: 615 ASD 607
SD
Sbjct: 388 ESD 390
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = -2
Query: 297 PPVRRE----DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVH 130
PP E D ++ I N+ + ++++ KG G + + + K+K T K FAY+
Sbjct: 49 PPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIE 108
Query: 129 FKFRADAAKAIQXLNG 82
F + A+ +NG
Sbjct: 109 FDDSSSIENAL-VMNG 123
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -2
Query: 285 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 124
+ D ++ + N+ + ++I++ G V ++ + K+K TG+ K FA+V F+
Sbjct: 42 KTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 696 VRTYKIEKRVVSKSIAKRKTWSKFGDSASDKP----GPNPATTNVAE 568
+ YKI +S + KRKT KFGD A D P NP TT+ E
Sbjct: 6 ISQYKINISSLSSPL-KRKTTRKFGDDAYDSPKYFMEGNPTTTSTFE 51
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 303 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 124
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 43 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 98
Query: 123 --FRADAA 106
F A++A
Sbjct: 99 SIFSAESA 106
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 303 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 124
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 63 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 118
Query: 123 --FRADAA 106
F A++A
Sbjct: 119 SIFSAESA 126
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 303 DQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 124
D PP R+ + I LS+ + + + +GPV + ++ +T H +GF +V F
Sbjct: 64 DSPPQLRK----LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFA 119
Query: 123 --FRADAA 106
F A++A
Sbjct: 120 SIFSAESA 127
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -2
Query: 267 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXL 88
+ I L N A + D++ +G+G + + + GF +V F+ + DA A+ L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN--------GFGFVDFQDQRDADDAVHDL 55
Query: 87 NG 82
NG
Sbjct: 56 NG 57
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = -2
Query: 279 DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKA 100
D T ++N + +A I+ + GP+ +++AK GFA+V FK A A
Sbjct: 27 DATEKELNNDALTIYDA-IEAVFSVMGPIKSIWMAKRPP-----GFAFVTFKRTVHAFDA 80
Query: 99 IQXLNGHGYDHLILNVE 49
++ LNG L VE
Sbjct: 81 VKYLNGKKICDLEAKVE 97
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 810 DEVEIDQGVLPPPXEVVENGLKIVTEYKYDNDNKKVKIVRTY-KIEKRVVSKSIAKRKTW 634
D V+ID+ + E+V+ +IVT++ + +V I+ Y K+ ++ K IA R+ W
Sbjct: 90 DLVDIDEIIPKTKTEIVDEKEQIVTDF----ERYRVLIINDYKKVSEKHYLKKIADREFW 145
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -2
Query: 261 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQXLNG 82
+ NLS+ + + L FG + + + ++ T CKG+A+V +A A+ LNG
Sbjct: 378 VYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSLNG 436
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 768 EVVENGLKIVTEYKYDNDNKKVKIV 694
+ V+ K+V +YKY NDN +V I+
Sbjct: 394 QYVDFAKKLVAQYKYGNDNTRVGII 418
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 768 EVVENGLKIVTEYKYDNDNKKVKIV 694
+ V+ K+V +YKY NDN +V I+
Sbjct: 407 QYVDFAKKLVAQYKYGNDNTRVGII 431
>U40954-3|AAL00885.1| 171|Caenorhabditis elegans Hypothetical
protein ZK813.4a protein.
Length = 171
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 463 TLKDNIAGWWLKTIKLPVIWALTLFLTGD--ELHEDIFSYISSSRVRPRLV 609
T+K NI W++ ++ + L L GD ++++DI I+ R RP++V
Sbjct: 108 TIKRNII--WIEVMEGDIAQTLGLVTVGDVHKIYDDICDIINKHRERPKIV 156
>U40954-2|ABB88226.1| 152|Caenorhabditis elegans Hypothetical
protein ZK813.4b protein.
Length = 152
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 463 TLKDNIAGWWLKTIKLPVIWALTLFLTGD--ELHEDIFSYISSSRVRPRLV 609
T+K NI W++ ++ + L L GD ++++DI I+ R RP++V
Sbjct: 89 TIKRNII--WIEVMEGDIAQTLGLVTVGDVHKIYDDICDIINKHRERPKIV 137
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.1
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = -2
Query: 330 SSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADI----DDLVKGF-GPVHKLYLAKEK 166
+S R G D +E V IS +N A AD+ D+ K GP K+Y ++
Sbjct: 185 ASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYT--DR 242
Query: 165 STGHCKGFAYVHFKFRADAAKAIQXLNGHGY 73
+TG KG + F + A +AI NG +
Sbjct: 243 NTGEPKGECMITFVDASAAQQAITMYNGQPF 273
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -2
Query: 810 DEVEIDQGVLPPPXEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAK----- 646
DEVE+ + V+N KIV + K++ + + +R K+E ++ K IAK
Sbjct: 331 DEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSESQ-MRRKKVEIMLIRKEIAKAQKQL 389
Query: 645 RKTWSKFG 622
R+ KFG
Sbjct: 390 REALGKFG 397
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 759 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 592
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 591 PATTNVAEDVFMQFITSKEESQRPDD 514
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
>AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical
protein C35E7.3 protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 439 QMVSLTCTTLKDNIAGWWLKTIKLP 513
Q V TC K + G LKTIKLP
Sbjct: 91 QRVQCTCCEYKKELVGCHLKTIKLP 115
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 759 ENGLKIVTEYKYDNDNKKV----KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPN 592
+N K + E K ++ +K + K V+ + ++ +K + + WSK + ++ P
Sbjct: 165 DNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKPEWSKKKEEKKEESAPE 224
Query: 591 PATTNVAEDVFMQFITSKEESQRPDD 514
P V E+ +EE + ++
Sbjct: 225 PVIEPVEEEETAASEGEEEEEEADEE 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,795,162
Number of Sequences: 27780
Number of extensions: 354232
Number of successful extensions: 1125
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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