Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P23
         (533 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce...    27   1.8  
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual     27   1.8  
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom...    26   4.1  
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce...    26   4.1  
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c...    25   5.4  
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    25   9.4  
SPBC23G7.07c |||replication regulator |Schizosaccharomyces pombe...    25   9.4  

>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 459

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 13  GIRAGNMKYLLXVLLFLYDSCYGRVALQETD 105
           G   G    +  +L  +YD  YGRV  QETD
Sbjct: 345 GTLGGRFTTIEGLLAQVYDELYGRVFSQETD 375


>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 815

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 489 IIHVACLYTLHKKSIWFLTCISEPIYHF 406
           I+ +A LY + KKS+W  + I     HF
Sbjct: 568 ILSIALLYLIEKKSVWLASLILGFSVHF 595


>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 781

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = -2

Query: 250 HYYSKLFSLSHYSNSLKRTDTGRRHPKF*EYKSNXTIDPSHRFFSGTL 107
           H  SK F   H S+S  R+D   RH      K N     +H     TL
Sbjct: 41  HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQTHPKHDKTL 88


>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 715

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 175 DAGDPYPSVLVNLNNDLKKITWNSN 249
           D G  +PS+  N  N   K TWN N
Sbjct: 407 DQGSAFPSLAKNPVNPYSKDTWNLN 431


>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1316

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 247  YYSKLFSLSHYSNSLKRTDTGRRHPKF*EYKSN 149
            Y  KL +     + L   DT +RHPKF   + N
Sbjct: 1282 YVEKLKTSHKLDDILSPRDTSKRHPKFLSSRRN 1314


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 72  VLRSRCFTRNGYSVPEKNRCEGSI 143
           V+++   TR   S+PE  +C+GS+
Sbjct: 227 VVKTLLQTRGSSSIPEVRKCKGSL 250


>SPBC23G7.07c |||replication regulator |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 277

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 184 DPYPSVLVNLNNDLKKITWNSNGEVI 261
           D YP  + +L    KK+  NSN E++
Sbjct: 131 DNYPEYIQHLPGFTKKVVQNSNPEIL 156


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,066,103
Number of Sequences: 5004
Number of extensions: 39809
Number of successful extensions: 113
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)