Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P23
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   3.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   4.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.4  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   6.4  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   6.4  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   8.5  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.5  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -2

Query: 460 TQKINMVSDMYF*TNLPLLQSYIRRPRTLXG 368
           +Q I + + +++  +LP+ Q Y+   R+L G
Sbjct: 197 SQVIRVANGIFYQKDLPMRQQYVMLARSLYG 227


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 199 VLVNLNNDLKKITWNSNGEVIQNYFIPP 282
           V V++ N L    W + G+ +Q    PP
Sbjct: 562 VTVDVRNALNSANWTAIGQALQRENTPP 589


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +3

Query: 27  QHEISTXCFVVPLRFVLRSRCFTRNGYSV---PEKNR 128
           QH  S  C+ +P   +     F RNG       EKNR
Sbjct: 198 QHSASPRCYPMPPEHMYNMFNFNRNGREARNRAEKNR 234


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 81  SRCFTRNGYSVPEKNRCEGSIVXFDLYSQNFG 176
           S C  RN ++    N C  +   F  Y + FG
Sbjct: 108 SECLERNVHTAELPNNCCQAYETFQCYFREFG 139


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 81  SRCFTRNGYSVPEKNRCEGSIVXFDLYSQNFG 176
           S C  RN ++    N C  +   F  Y + FG
Sbjct: 108 SECLERNVHTAELPNNCCQAYETFQCYFREFG 139


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 87  CFTRNGYSVPEKNRC 131
           CF R GY   + NRC
Sbjct: 97  CFCRGGYVRNKSNRC 111


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 87  CFTRNGYSVPEKNRC 131
           CF RNGY   + +RC
Sbjct: 96  CFCRNGYVRDKYDRC 110


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 306 CRIRMRHNGGDKIILNHFSITIPSY 232
           C+I  R   GD+I+   +S  +P Y
Sbjct: 62  CQIAYRRIEGDRIVCAAYSHELPRY 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,726
Number of Sequences: 2352
Number of extensions: 9966
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)