Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P23
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069727-1|AAL39872.1|  820|Drosophila melanogaster LP03135p pro...    29   3.0  
AE013599-2866|AAF57571.3|  862|Drosophila melanogaster CG10062-P...    29   3.0  
BT003480-1|AAO39483.1|  853|Drosophila melanogaster RE58242p pro...    29   5.3  
AE014298-1852|AAF48232.2|  853|Drosophila melanogaster CG32645-P...    29   5.3  

>AY069727-1|AAL39872.1|  820|Drosophila melanogaster LP03135p
           protein.
          Length = 820

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 178 AGDPYPSVLVNLNNDLKKITWNSNGEVIQNYFIPP-VVSHSY 300
           AG  +  + +N+ ND + + W+ N  +I+    PP +V  SY
Sbjct: 710 AGPSHMGIFINVKNDARILNWSFNDTLIREQAEPPYMVYFSY 751


>AE013599-2866|AAF57571.3|  862|Drosophila melanogaster CG10062-PA
           protein.
          Length = 862

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 178 AGDPYPSVLVNLNNDLKKITWNSNGEVIQNYFIPP-VVSHSY 300
           AG  +  + +N+ ND + + W+ N  +I+    PP +V  SY
Sbjct: 752 AGPSHMGIFINVKNDARILNWSFNDTLIREQAEPPYMVYFSY 793


>BT003480-1|AAO39483.1|  853|Drosophila melanogaster RE58242p
           protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 288 HNGGDKIILNHFSITIPSYFL*VIIQI 208
           H GGD +++  F +T+ SYFL  ++ +
Sbjct: 805 HLGGDLMVVMFFGLTVASYFLSFVVSM 831


>AE014298-1852|AAF48232.2|  853|Drosophila melanogaster CG32645-PB
           protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 288 HNGGDKIILNHFSITIPSYFL*VIIQI 208
           H GGD +++  F +T+ SYFL  ++ +
Sbjct: 805 HLGGDLMVVMFFGLTVASYFLSFVVSM 831


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,065,525
Number of Sequences: 53049
Number of extensions: 423748
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)