Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P19
         (821 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase pro...   303   5e-82
D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.              303   5e-82
BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase p...   303   5e-82
AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase p...   303   5e-82
AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens ...   105   2e-22

>D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase
           protein.
          Length = 597

 Score =  303 bits (744), Expect = 5e-82
 Identities = 143/215 (66%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = +3

Query: 180 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 356
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123

Query: 357 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 536
           +TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F    +KLRRGDIIG
Sbjct: 124 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 183

Query: 537 CVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQI 716
             G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ 
Sbjct: 184 VQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK 243

Query: 717 FYTRAKIIAYVRRFLDNMGFLXVETPLMNMVPGGA 821
           F  R+KII Y+R FLD +GFL +ETP+MN++PGGA
Sbjct: 244 FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGA 278


>D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.
          Length = 601

 Score =  303 bits (744), Expect = 5e-82
 Identities = 143/215 (66%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = +3

Query: 180 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 356
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 71  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 127

Query: 357 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 536
           +TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F    +KLRRGDIIG
Sbjct: 128 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 187

Query: 537 CVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQI 716
             G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ 
Sbjct: 188 VQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK 247

Query: 717 FYTRAKIIAYVRRFLDNMGFLXVETPLMNMVPGGA 821
           F  R+KII Y+R FLD +GFL +ETP+MN++PGGA
Sbjct: 248 FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGA 282


>BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 597

 Score =  303 bits (744), Expect = 5e-82
 Identities = 143/215 (66%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = +3

Query: 180 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 356
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123

Query: 357 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 536
           +TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F    +KLRRGDIIG
Sbjct: 124 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 183

Query: 537 CVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQI 716
             G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ 
Sbjct: 184 VQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK 243

Query: 717 FYTRAKIIAYVRRFLDNMGFLXVETPLMNMVPGGA 821
           F  R+KII Y+R FLD +GFL +ETP+MN++PGGA
Sbjct: 244 FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGA 278


>AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 625

 Score =  303 bits (744), Expect = 5e-82
 Identities = 143/215 (66%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = +3

Query: 180 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 356
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF+V ISL +FI+KY +L  GD L +
Sbjct: 95  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 151

Query: 357 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 536
           +TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F    +KLRRGDIIG
Sbjct: 152 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 211

Query: 537 CVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQI 716
             G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ 
Sbjct: 212 VQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK 271

Query: 717 FYTRAKIIAYVRRFLDNMGFLXVETPLMNMVPGGA 821
           F  R+KII Y+R FLD +GFL +ETP+MN++PGGA
Sbjct: 272 FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGA 306


>AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44621 fis, clone BRACE2016896, highly  similar
           to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
          Length = 423

 Score =  105 bits (252), Expect = 2e-22
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = +3

Query: 630 HLHFGLKDKETRFRKRYLDLILNDKVRQIFYTRAKIIAYVRRFLDNMGFLXVETPLMNMV 809
           HLHFGLKDKETR+R+RYLDLILND VRQ F  R+KII Y+R FLD +GFL +ETP+MN++
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII 144

Query: 810 PGGA 821
           P GA
Sbjct: 145 PEGA 148



 Score = 34.3 bits (75), Expect = 0.54
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +3

Query: 180 QEEEISPNEYYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEK 320
           +EE + PN+YYK+RS A+  L  GLK+      +  + + L +F+ +
Sbjct: 67  EEESVDPNQYYKIRSQAI-HLHFGLKDKETRYRQRYLDLILNDFVRQ 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,185,732
Number of Sequences: 237096
Number of extensions: 2054749
Number of successful extensions: 7307
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7303
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)