Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P18
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...   202   2e-52
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z93388-11|CAB07660.2|  319|Caenorhabditis elegans Hypothetical p...    28   6.6  

>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score =  202 bits (493), Expect = 2e-52
 Identities = 106/215 (49%), Positives = 131/215 (60%), Gaps = 12/215 (5%)
 Frame = +2

Query: 110 PQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSD----------- 256
           P + VNK KK F+G+PAP GYV GVGRGATGFTTRSDIGPARD  ++ +           
Sbjct: 6   PGSLVNKTKKFFMGMPAPTGYVPGVGRGATGFTTRSDIGPARDPTELPEAGPVGPSPQGA 65

Query: 257 DRHAPPAAKRKKTXXXXXXXXXXXXXXXXFSGYSGSLFSKDPYDKDDAEADAIYESIDXX 436
              + P AKR +                 FSGYSGSLFSKDPYD++D +AD IY  +D  
Sbjct: 66  SSSSAPPAKRARDDDGDGEDLNEANYDE-FSGYSGSLFSKDPYDQEDEDADRIYNEVDDR 124

Query: 437 XXXXXXXXXXXXXXXXXXXXXQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQ 616
                                ++RPKIQQ F DLKR+L  V+EDEW AIPEVGD RN+ +
Sbjct: 125 LDERHKERREKKYKELVELFHKDRPKIQQGFQDLKRQLAEVTEDEWQAIPEVGDMRNKAK 184

Query: 617 RNPRAEKFTPLPDSVLSRNLG-GESSSSIDPGSGL 718
           RN RAEKFTP+PDS+++ N+  G+ S SID G+GL
Sbjct: 185 RNARAEKFTPVPDSIIAMNMNYGQMSHSIDSGNGL 219


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 518  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 664
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 518  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 664
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 518  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 664
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z93388-11|CAB07660.2|  319|Caenorhabditis elegans Hypothetical
           protein T10C6.3 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 544 TFQVRELLLNFWPLLSISFQVFFKSFFSILLPLLIHPLVNGLIDCICLC 398
           +F    +LLN  P+LSIS+   F +F   LLP+++   +    +  C C
Sbjct: 77  SFSTLGVLLNIKPVLSISY--LFGNFSIFLLPVILISFLLMSFNRFCAC 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,509,494
Number of Sequences: 27780
Number of extensions: 308751
Number of successful extensions: 1092
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)